RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 HMG20BQ9P0W2 317 aa15.48■□□□□ 0.07
ABCF1-204ENST00000468958 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
ABCF1-204ENST00000468958 PDS5AQ29RF7 1337 aaKnown RBP15.47■□□□□ 0.07
ABCF1-204ENST00000468958 LDHBP07195 334 aaKnown RBP15.47■□□□□ 0.07
ABCF1-204ENST00000468958 ARID4AP29374 1257 aaPredicted RBP15.47■□□□□ 0.07
ABCF1-204ENST00000468958 MCAMP43121 646 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 NFIAQ12857 509 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 TNNI3KQ59H18 835 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 SIRT2Q8IXJ6 389 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 DBNDD2Q9BQY9 259 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 BEGAINQ9BUH8 593 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 TLR7Q9NYK1 1049 aaKnown RBP15.47■□□□□ 0.07
ABCF1-204ENST00000468958 FPGT-TNNI3KV9GXZ4 949 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 SIPA1L1O43166 1804 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 RFX7Q2KHR2 1363 aa15.47■□□□□ 0.07
ABCF1-204ENST00000468958 TRPA1O75762 1119 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
ABCF1-204ENST00000468958 TNFAIP1Q13829 316 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 SUPT20HL1Q3ZLR7 823 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 SPRYD7Q5W111 196 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 TBC1D9Q6ZT07 1266 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 ABCF2Q9UG63 623 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 EXOC6BQ9Y2D4 811 aa15.46■□□□□ 0.07
ABCF1-204ENST00000468958 GAKO14976 1311 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 PPP1R12BO60237 982 aaPredicted RBP15.45■□□□□ 0.06
ABCF1-204ENST00000468958 HMMRO75330 724 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
ABCF1-204ENST00000468958 ZFPM1Q8IX07 1006 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 EAF2Q96CJ1 260 aaPredicted RBP15.45■□□□□ 0.06
ABCF1-204ENST00000468958 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 FAM198AQ9UFP1 575 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 PHIPQ8WWQ0 1821 aa15.45■□□□□ 0.06
ABCF1-204ENST00000468958 CA12O43570 354 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 TM4SF4P48230 202 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 TNNI2P48788 182 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
ABCF1-204ENST00000468958 SAGE1Q9NXZ1 904 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 DBNLQ9UJU6 430 aaKnown RBP15.44■□□□□ 0.06
ABCF1-204ENST00000468958 ATAD5Q96QE3 1844 aa15.44■□□□□ 0.06
ABCF1-204ENST00000468958 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
ABCF1-204ENST00000468958 SLURP2P0DP57 97 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 MECOMQ03112 1051 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 TCP10Q12799 353 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 OS9Q13438 667 aaPredicted RBP15.43■□□□□ 0.06
ABCF1-204ENST00000468958 FKBP1CQ5VVH2 108 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
ABCF1-204ENST00000468958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.43■□□□□ 0.06
ABCF1-204ENST00000468958 R3HDMLQ9H3Y0 253 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 ELP3Q9H9T3 547 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 SNRKQ9NRH2 765 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 PTPRFP10586 1907 aa15.43■□□□□ 0.06
ABCF1-204ENST00000468958 DOCK1Q14185 1865 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 ATRNL1Q5VV63 1379 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 CAPN15O75808 1086 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 IREB2P48200 963 aaKnown RBP15.42■□□□□ 0.06
ABCF1-204ENST00000468958 VGLL4Q14135 290 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 GORABQ5T7V8 394 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
ABCF1-204ENST00000468958 NSUN4Q96CB9 384 aaKnown RBP15.42■□□□□ 0.06
ABCF1-204ENST00000468958 SLC10A4Q96EP9 437 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 DDX4Q9NQI0 724 aaKnown RBP15.42■□□□□ 0.06
ABCF1-204ENST00000468958 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 MROH7-TTC4A0A0A0MT08 1334 aa15.42■□□□□ 0.06
ABCF1-204ENST00000468958 ZSWIM8A7E2V4 1837 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 TBC1D8O95759 1140 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 CYP2E1P05181 493 aaPredicted RBP15.41■□□□□ 0.06
ABCF1-204ENST00000468958 RHBDL3P58872 404 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 ERICH6Q7L0X2 663 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 SH3BP5LQ7L8J4 393 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 DZIP1Q86YF9 867 aaKnown RBP15.41■□□□□ 0.06
ABCF1-204ENST00000468958 FAM151AQ8WW52 585 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 FAM163AQ96GL9 167 aaPredicted RBP15.41■□□□□ 0.06
ABCF1-204ENST00000468958 TMOD2Q9NZR1 351 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 NDUFB9Q9Y6M9 179 aa15.41■□□□□ 0.06
ABCF1-204ENST00000468958 IGF2BP3O00425 579 aaKnown RBP eCLIP15.4■□□□□ 0.06
ABCF1-204ENST00000468958 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
ABCF1-204ENST00000468958 UQCRFS1P1P0C7P4 283 aa15.4■□□□□ 0.06
ABCF1-204ENST00000468958 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
ABCF1-204ENST00000468958 BTDP43251 543 aa15.4■□□□□ 0.06
ABCF1-204ENST00000468958 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
ABCF1-204ENST00000468958 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
ABCF1-204ENST00000468958 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
ABCF1-204ENST00000468958 IL1RAPL2Q9NP60 686 aa15.4■□□□□ 0.06
ABCF1-204ENST00000468958 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
ABCF1-204ENST00000468958 MYH1P12882 1939 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 MYH7P12883 1935 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 GPR75-ASB3A0A0A6YYF3 556 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 UNCXA6NJT0 531 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 ZAP70P43403 619 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 RGS3P49796 1198 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms