RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
TRIM46-207ENST00000468878 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
TRIM46-207ENST00000468878 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
TRIM46-207ENST00000468878 SIK1P57059 783 aa20.17■□□□□ 0.82
TRIM46-207ENST00000468878 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
TRIM46-207ENST00000468878 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
TRIM46-207ENST00000468878 HOMER1Q86YM7 354 aa20.17■□□□□ 0.82
TRIM46-207ENST00000468878 STAMQ92783 540 aa20.17■□□□□ 0.82
TRIM46-207ENST00000468878 DYNC1I1O14576 645 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 PNOCQ13519 176 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 WTAPQ15007 396 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 C8orf37Q96NL8 207 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 SOS2Q07890 1332 aaPredicted RBP20.16■□□□□ 0.82
TRIM46-207ENST00000468878 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 GUCY1A2P33402 732 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
TRIM46-207ENST00000468878 CFAP100Q494V2 611 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 TRIM22Q8IYM9 498 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 CCDC87Q9NVE4 849 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 HPS5Q9UPZ3 1129 aa20.16■□□□□ 0.82
TRIM46-207ENST00000468878 C5P01031 1676 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 NR5A1Q13285 461 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 COBLO75128 1261 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 PFKFB1P16118 471 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 CHRNDQ07001 517 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 SMAP1Q8IYB5 467 aaPredicted RBP20.15■□□□□ 0.82
TRIM46-207ENST00000468878 CNNM3Q8NE01 707 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 KIAA1524Q8TCG1 905 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 COL5A2P05997 1499 aaPredicted RBP20.15■□□□□ 0.82
TRIM46-207ENST00000468878 IGSF3O75054 1194 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 PDIA4P13667 645 aaKnown RBP20.15■□□□□ 0.82
TRIM46-207ENST00000468878 MTERF4Q7Z6M4 381 aaKnown RBP20.15■□□□□ 0.82
TRIM46-207ENST00000468878 GRAMD1CQ8IYS0 662 aa20.15■□□□□ 0.82
TRIM46-207ENST00000468878 CSF1RP07333 972 aa20.14■□□□□ 0.82
TRIM46-207ENST00000468878 UQCRFS1P1P0C7P4 283 aa20.14■□□□□ 0.82
TRIM46-207ENST00000468878 RASSF8Q8NHQ8 419 aa20.14■□□□□ 0.81
TRIM46-207ENST00000468878 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
TRIM46-207ENST00000468878 AFMP43652 599 aa20.14■□□□□ 0.81
TRIM46-207ENST00000468878 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
TRIM46-207ENST00000468878 TPM4P67936 248 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 NGLY1Q96IV0 654 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 PES1O00541 588 aaKnown RBP20.13■□□□□ 0.81
TRIM46-207ENST00000468878 CDKL5O76039 1030 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 KIF23Q02241 960 aaPredicted RBP20.13■□□□□ 0.81
TRIM46-207ENST00000468878 RTN1Q16799 776 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
TRIM46-207ENST00000468878 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
TRIM46-207ENST00000468878 SNW1Q13573 536 aaKnown RBP20.12■□□□□ 0.81
TRIM46-207ENST00000468878 FAM47AQ5JRC9 791 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 SRCAPQ6ZRS2 3230 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 CPDO75976 1380 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 USP27XA6NNY8 438 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 ATP1A3P13637 1013 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 DIS3L2Q8IYB7 885 aaKnown RBP20.12■□□□□ 0.81
TRIM46-207ENST00000468878 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 FOXN1O15353 648 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 ERFEQ4G0M1 354 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 ADALQ6DHV7 355 aa20.12■□□□□ 0.81
TRIM46-207ENST00000468878 TRMT44Q8IYL2 757 aaKnown RBP20.12■□□□□ 0.81
TRIM46-207ENST00000468878 EPB41L4AQ9HCS5 686 aaPredicted RBP20.12■□□□□ 0.81
TRIM46-207ENST00000468878 ITPK1Q13572 414 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 ANKRD18AQ8IVF6 992 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
TRIM46-207ENST00000468878 AATFQ9NY61 560 aaKnown RBP eCLIP20.11■□□□□ 0.81
TRIM46-207ENST00000468878 SRP68Q9UHB9 627 aaKnown RBP20.11■□□□□ 0.81
TRIM46-207ENST00000468878 CTAGE5O15320 804 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 RAD21O60216 631 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
TRIM46-207ENST00000468878 KIAA1468Q9P260 1216 aa20.11■□□□□ 0.81
TRIM46-207ENST00000468878 AFDNP55196 1824 aaKnown RBP20.11■□□□□ 0.81
TRIM46-207ENST00000468878 STX17P56962 302 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 PTF1AQ7RTS3 328 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 CPLX3Q8WVH0 158 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
TRIM46-207ENST00000468878 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
TRIM46-207ENST00000468878 CCDC112Q8NEF3 446 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 CASP1P29466 404 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 EVX2Q03828 476 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 AKNAD1Q5T1N1 836 aa20.1■□□□□ 0.81
TRIM46-207ENST00000468878 SH2B2O14492 632 aaPredicted RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 MAGEB6P1A0A0J9YX57 407 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 GRIN1Q05586 938 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 TRIM28Q13263 835 aaKnown RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 PPP4R3BQ5MIZ7 849 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 CCAR2Q8N163 923 aaKnown RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 TDRD7Q8NHU6 1098 aaKnown RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
TRIM46-207ENST00000468878 V9GY48 417 aaPredicted RBP20.09■□□□□ 0.81
TRIM46-207ENST00000468878 POLR2DO15514 142 aaKnown RBP20.08■□□□□ 0.81
TRIM46-207ENST00000468878 NMT2O60551 498 aa20.08■□□□□ 0.81
TRIM46-207ENST00000468878 TPM3P06753 285 aa20.08■□□□□ 0.81
TRIM46-207ENST00000468878 PTPN14Q15678 1187 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms