RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 IFNL1Q8IU54 200 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 ZNF296Q8WUU4 475 aaPredicted RBP8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 OPTNQ96CV9 577 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 C1orf115Q9H7X2 142 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 CSADQ9Y600 493 aa8.86□□□□□ -0.99
SNRPD3-205ENST00000468770 ARAP2Q8WZ64 1704 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 GPR25O00155 361 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 SURF6O75683 361 aaKnown RBP8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 MS4A1P11836 297 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 TCP10Q12799 353 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 VGLL4Q14135 290 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 POLA2Q14181 598 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 MIGA2Q7L4E1 593 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 CTU1Q7Z7A3 348 aaKnown RBP8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.85□□□□□ -0.992e-8■□□□□ 11.3
SNRPD3-205ENST00000468770 SSH3Q8TE77 659 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 FAM151AQ8WW52 585 aa8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
SNRPD3-205ENST00000468770 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 FKTNO75072 461 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 UQCRFS1P1P0C7P4 283 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 GJA5P36382 358 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 NFIAQ12857 509 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 NOM1Q5C9Z4 860 aaKnown RBP8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 CCDC158Q5M9N0 1113 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 SPATA5Q8NB90 893 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 PANK1Q8TE04 598 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 OTUD5Q96G74 571 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 WRNIP1Q96S55 665 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 ZNF341Q9BYN7 854 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 HMG20BQ9P0W2 317 aa8.84□□□□□ -0.99
SNRPD3-205ENST00000468770 MYH13Q9UKX3 1938 aa8.84□□□□□ -1
SNRPD3-205ENST00000468770 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
SNRPD3-205ENST00000468770 IGF2BP3O00425 579 aaKnown RBP eCLIP8.83□□□□□ -1
SNRPD3-205ENST00000468770 LDHCP07864 332 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 GTF2A2P52657 109 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 GSTO1P78417 241 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 MECOMQ03112 1051 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 PKN2Q16513 984 aaKnown RBP8.83□□□□□ -1
SNRPD3-205ENST00000468770 TNNI3KQ59H18 835 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 TBC1D9Q6ZT07 1266 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 ERO1BQ86YB8 467 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 ZSCAN29Q8IWY8 852 aaPredicted RBP8.83□□□□□ -1
SNRPD3-205ENST00000468770 CNKSR2Q8WXI2 1034 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
SNRPD3-205ENST00000468770 PTPN18Q99952 460 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 R3HDMLQ9H3Y0 253 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 RAI14Q9P0K7 980 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 LRP2BPQ9P2M1 347 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 FAM198AQ9UFP1 575 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 FPGT-TNNI3KV9GXZ4 949 aa8.83□□□□□ -1
SNRPD3-205ENST00000468770 GAKO14976 1311 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 ENTPD3O75355 529 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 WDHD1O75717 1129 aaPredicted RBP8.82□□□□□ -1
SNRPD3-205ENST00000468770 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
SNRPD3-205ENST00000468770 MCAMP43121 646 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 BTDP43251 543 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 RGS3P49796 1198 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 CCL15Q16663 113 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 PI16Q6UXB8 463 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 ZFPM1Q8IX07 1006 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 MS4A4AQ96JQ5 239 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 IDI2Q9BXS1 227 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
SNRPD3-205ENST00000468770 SNCAIPQ9Y6H5 919 aa8.82□□□□□ -1
SNRPD3-205ENST00000468770 RPAP1Q9BWH6 1393 aaPredicted RBP8.82□□□□□ -1
SNRPD3-205ENST00000468770 MROH7-TTC4A0A0A0MT08 1334 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 GPR75-ASB3A0A0A6YYF3 556 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 IRF6O14896 467 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 CETPP11597 493 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 INPP5BP32019 993 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 PPATQ06203 517 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 CRHR2Q13324 411 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 SNAPC2Q13487 334 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 PICALMQ13492 652 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 CEP85Q6P2H3 762 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 BRI3BPQ8WY22 251 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 NSUN4Q96CB9 384 aaKnown RBP8.81□□□□□ -1
SNRPD3-205ENST00000468770 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 ZFYVE28Q9HCC9 887 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 SNRKQ9NRH2 765 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 ZNF112Q9UJU3 913 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 RCAN3Q9UKA8 241 aa8.81□□□□□ -1
SNRPD3-205ENST00000468770 AK9Q5TCS8 1911 aa8.8□□□□□ -1
SNRPD3-205ENST00000468770 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
SNRPD3-205ENST00000468770 SP3Q02447 781 aa8.8□□□□□ -1
SNRPD3-205ENST00000468770 PPIL2Q13356 520 aa8.8□□□□□ -1
SNRPD3-205ENST00000468770 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
SNRPD3-205ENST00000468770 HSP90AB4PQ58FF6 505 aa8.8□□□□□ -1
SNRPD3-205ENST00000468770 ERC1Q8IUD2 1116 aa8.8□□□□□ -1
SNRPD3-205ENST00000468770 ZNF384Q8TF68 577 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms