RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 NEUROD6Q96NK8 337 aa18.12■□□□□ 0.49
COL16A1-208ENST00000468459 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
COL16A1-208ENST00000468459 AKAP2Q9Y2D5 859 aa18.12■□□□□ 0.49
COL16A1-208ENST00000468459 MANSC4A6NHS7 340 aaPredicted RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 IREB2P48200 963 aaKnown RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 INHBEP58166 350 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 HDAC1Q13547 482 aaPredicted RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 EAF2Q96CJ1 260 aaPredicted RBP18.11■□□□□ 0.49
COL16A1-208ENST00000468459 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 ZDHHC15Q96MV8 337 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 DBNDD2Q9BQY9 259 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 GPR108Q9NPR9 543 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 SUGT1Q9Y2Z0 365 aa18.11■□□□□ 0.49
COL16A1-208ENST00000468459 IGF2BP3O00425 579 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL16A1-208ENST00000468459 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
COL16A1-208ENST00000468459 IGHDP01880 384 aa18.1■□□□□ 0.49
COL16A1-208ENST00000468459 IFNL1Q8IU54 200 aa18.1■□□□□ 0.49
COL16A1-208ENST00000468459 ANKRD13AQ8IZ07 590 aa18.1■□□□□ 0.49
COL16A1-208ENST00000468459 TMEM39BQ9GZU3 492 aa18.1■□□□□ 0.49
COL16A1-208ENST00000468459 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
COL16A1-208ENST00000468459 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-208ENST00000468459 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
COL16A1-208ENST00000468459 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-208ENST00000468459 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
COL16A1-208ENST00000468459 MLLT1Q03111 559 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-208ENST00000468459 CCDC102BQ68D86 513 aa18.09■□□□□ 0.49
COL16A1-208ENST00000468459 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-208ENST00000468459 AACSQ86V21 672 aa18.09■□□□□ 0.49
COL16A1-208ENST00000468459 TEKT1Q969V4 418 aa18.09■□□□□ 0.49
COL16A1-208ENST00000468459 DBNLQ9UJU6 430 aaKnown RBP18.09■□□□□ 0.49
COL16A1-208ENST00000468459 AKAP11Q9UKA4 1901 aa18.08■□□□□ 0.49
COL16A1-208ENST00000468459 ZBTB22O15209 634 aa18.08■□□□□ 0.48
COL16A1-208ENST00000468459 PKN2Q16513 984 aaKnown RBP18.08■□□□□ 0.48
COL16A1-208ENST00000468459 HHIPL2Q6UWX4 724 aa18.08■□□□□ 0.48
COL16A1-208ENST00000468459 PTPN18Q99952 460 aa18.08■□□□□ 0.48
COL16A1-208ENST00000468459 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.48
COL16A1-208ENST00000468459 CACNB3P54284 484 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 GORABQ5T7V8 394 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 FKBP1CQ5VVH2 108 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL16A1-208ENST00000468459 MS4A4AQ96JQ5 239 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 ECM29Q5VYK3 1845 aa18.07■□□□□ 0.48
COL16A1-208ENST00000468459 FKTNO75072 461 aa18.06■□□□□ 0.48
COL16A1-208ENST00000468459 TNNI2P48788 182 aa18.06■□□□□ 0.48
COL16A1-208ENST00000468459 RASGRF1Q13972 1273 aa18.06■□□□□ 0.48
COL16A1-208ENST00000468459 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
COL16A1-208ENST00000468459 WDR66Q8TBY9 1149 aa18.06■□□□□ 0.48
COL16A1-208ENST00000468459 RWDD1Q9H446 243 aaPredicted RBP18.06■□□□□ 0.48
COL16A1-208ENST00000468459 MAST3O60307 1309 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 NEFLP07196 543 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 MAP3K9P80192 1104 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 VGLL4Q14135 290 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 PI16Q6UXB8 463 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
COL16A1-208ENST00000468459 OPTNQ96CV9 577 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 ELP3Q9H9T3 547 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-208ENST00000468459 HTTP42858 3142 aa18.05■□□□□ 0.48
COL16A1-208ENST00000468459 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
COL16A1-208ENST00000468459 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
COL16A1-208ENST00000468459 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
COL16A1-208ENST00000468459 IFIT2P09913 472 aaKnown RBP18.03■□□□□ 0.48
COL16A1-208ENST00000468459 ARID4AP29374 1257 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-208ENST00000468459 PRDX5P30044 214 aa18.03■□□□□ 0.48
COL16A1-208ENST00000468459 SOX10P56693 466 aa18.03■□□□□ 0.48
COL16A1-208ENST00000468459 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
COL16A1-208ENST00000468459 FBXO46Q6PJ61 603 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-208ENST00000468459 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-208ENST00000468459 MCAMP43121 646 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 CRHR2Q13324 411 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 ANKRD45Q5TZF3 282 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 GCC1Q96CN9 775 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 SNRKQ9NRH2 765 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 DAGLAQ9Y4D2 1042 aa18.02■□□□□ 0.48
COL16A1-208ENST00000468459 SPDYE5A6NIY4 337 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 SEMA3EO15041 775 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 CCDC158Q5M9N0 1113 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 TSHZ3Q63HK5 1081 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 CDC42EP5Q6NZY7 148 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 TMOD2Q9NZR1 351 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 DENND2AQ9ULE3 1009 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 SNCAIPQ9Y6H5 919 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 NDUFB9Q9Y6M9 179 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 MYH13Q9UKX3 1938 aa18.01■□□□□ 0.47
COL16A1-208ENST00000468459 RPAP1Q9BWH6 1393 aaPredicted RBP18.01■□□□□ 0.47
COL16A1-208ENST00000468459 CAP1Q01518 475 aa18■□□□□ 0.47
COL16A1-208ENST00000468459 NFIAQ12857 509 aa18■□□□□ 0.47
COL16A1-208ENST00000468459 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
COL16A1-208ENST00000468459 BRCA2P51587 3418 aa17.99■□□□□ 0.47
COL16A1-208ENST00000468459 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
COL16A1-208ENST00000468459 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
COL16A1-208ENST00000468459 FAM151AQ8WW52 585 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms