RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PHKA1P46020 1223 aa26.21■■□□□ 1.79
COL9A3-207ENST00000467819 DCAF15Q66K64 600 aa26.21■■□□□ 1.79
COL9A3-207ENST00000467819 ERO1BQ86YB8 467 aa26.21■■□□□ 1.79
COL9A3-207ENST00000467819 FAM43AQ8N2R8 423 aa26.21■■□□□ 1.79
COL9A3-207ENST00000467819 CCER2I3L3R5 266 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 LDHBP07195 334 aaKnown RBP26.2■■□□□ 1.78
COL9A3-207ENST00000467819 CAP1Q01518 475 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 TCP10Q12799 353 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 CDC42EP5Q6NZY7 148 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 MIGA2Q7L4E1 593 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 ZFYVE28Q9HCC9 887 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 PTPN22Q9Y2R2 807 aa26.2■■□□□ 1.78
COL9A3-207ENST00000467819 KIAA0100Q14667 2235 aaKnown RBP26.2■■□□□ 1.78
COL9A3-207ENST00000467819 ZSWIM8A7E2V4 1837 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 DOCK2Q92608 1830 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 SLC34A2O95436 690 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 FAM151AQ8WW52 585 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 ZNF341Q9BYN7 854 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 DENND2AQ9ULE3 1009 aa26.19■■□□□ 1.78
COL9A3-207ENST00000467819 RBBP6Q7Z6E9 1792 aaKnown RBP26.19■■□□□ 1.78
COL9A3-207ENST00000467819 ADORA1P30542 326 aa26.18■■□□□ 1.78
COL9A3-207ENST00000467819 COPRSQ9NQ92 184 aa26.18■■□□□ 1.78
COL9A3-207ENST00000467819 IRF6O14896 467 aa26.17■■□□□ 1.78
COL9A3-207ENST00000467819 CETPP11597 493 aa26.17■■□□□ 1.78
COL9A3-207ENST00000467819 INPP5BP32019 993 aa26.17■■□□□ 1.78
COL9A3-207ENST00000467819 NFIAQ12857 509 aa26.17■■□□□ 1.78
COL9A3-207ENST00000467819 SALL1Q9NSC2 1324 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 SEMA3EO15041 775 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 PPIL2Q13356 520 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 SNAPC2Q13487 334 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 CCDC102BQ68D86 513 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 USP40Q9NVE5 1235 aa26.16■■□□□ 1.78
COL9A3-207ENST00000467819 BTBD19C9JJ37 291 aa26.15■■□□□ 1.78
COL9A3-207ENST00000467819 INTS3Q68E01 1043 aaKnown RBP26.15■■□□□ 1.78
COL9A3-207ENST00000467819 ARHGAP45Q92619 1136 aa26.15■■□□□ 1.78
COL9A3-207ENST00000467819 SRGAP3O43295 1099 aa26.14■■□□□ 1.78
COL9A3-207ENST00000467819 WDHD1O75717 1129 aaPredicted RBP26.14■■□□□ 1.78
COL9A3-207ENST00000467819 GNAI3P08754 354 aa26.14■■□□□ 1.78
COL9A3-207ENST00000467819 TIMM10P62072 90 aa26.14■■□□□ 1.78
COL9A3-207ENST00000467819 PRPF38BQ5VTL8 546 aaKnown RBP26.14■■□□□ 1.78
COL9A3-207ENST00000467819 FAM198AQ9UFP1 575 aa26.14■■□□□ 1.78
COL9A3-207ENST00000467819 POTEFA5A3E0 1075 aa26.13■■□□□ 1.77
COL9A3-207ENST00000467819 PPATQ06203 517 aa26.12■■□□□ 1.77
COL9A3-207ENST00000467819 RASGRF1Q13972 1273 aa26.12■■□□□ 1.77
COL9A3-207ENST00000467819 ZGPATQ8N5A5 531 aaKnown RBP26.12■■□□□ 1.77
COL9A3-207ENST00000467819 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.12■■□□□ 1.77
COL9A3-207ENST00000467819 BRCA2P51587 3418 aa26.12■■□□□ 1.77
COL9A3-207ENST00000467819 A0A1B0GUL7 405 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 TFCP2Q12800 502 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 ARHGEF6Q15052 776 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 DZIP1Q86YF9 867 aaKnown RBP26.11■■□□□ 1.77
COL9A3-207ENST00000467819 ZFPM1Q8IX07 1006 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 ZCCHC17Q9NP64 241 aaKnown RBP26.11■■□□□ 1.77
COL9A3-207ENST00000467819 ABCF2Q9UG63 623 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 ZNF112Q9UJU3 913 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 TNNQ9UQP3 1299 aa26.11■■□□□ 1.77
COL9A3-207ENST00000467819 TLR2O60603 784 aa26.1■■□□□ 1.77
COL9A3-207ENST00000467819 FRAT1Q92837 279 aaPredicted RBP26.1■■□□□ 1.77
COL9A3-207ENST00000467819 ARMC5Q96C12 935 aa26.1■■□□□ 1.77
COL9A3-207ENST00000467819 XAGE2Q96GT9 111 aa26.1■■□□□ 1.77
COL9A3-207ENST00000467819 RGS3P49796 1198 aa26.09■■□□□ 1.77
COL9A3-207ENST00000467819 MTX1Q13505 466 aa26.09■■□□□ 1.77
COL9A3-207ENST00000467819 AKAP2Q9Y2D5 859 aa26.09■■□□□ 1.77
COL9A3-207ENST00000467819 PTCH2Q9Y6C5 1203 aa26.09■■□□□ 1.77
COL9A3-207ENST00000467819 MKI67P46013 3256 aaKnown RBP26.09■■□□□ 1.77
COL9A3-207ENST00000467819 GAKO14976 1311 aa26.09■■□□□ 1.77
COL9A3-207ENST00000467819 IPO8O15397 1037 aaKnown RBP26.08■■□□□ 1.77
COL9A3-207ENST00000467819 TRIM27P14373 513 aa26.08■■□□□ 1.77
COL9A3-207ENST00000467819 ARHGAP39Q9C0H5 1083 aa26.08■■□□□ 1.77
COL9A3-207ENST00000467819 ZBTB22O15209 634 aa26.07■■□□□ 1.76
COL9A3-207ENST00000467819 BCAR3O75815 825 aa26.07■■□□□ 1.76
COL9A3-207ENST00000467819 ECM2O94769 699 aaPredicted RBP26.07■■□□□ 1.76
COL9A3-207ENST00000467819 MVPQ14764 893 aaKnown RBP26.07■■□□□ 1.76
COL9A3-207ENST00000467819 KIF22Q14807 665 aa26.07■■□□□ 1.76
COL9A3-207ENST00000467819 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
COL9A3-207ENST00000467819 NEUROD6Q96NK8 337 aa26.07■■□□□ 1.76
COL9A3-207ENST00000467819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.07■■□□□ 1.76
COL9A3-207ENST00000467819 PDS5AQ29RF7 1337 aaKnown RBP26.07■■□□□ 1.76
COL9A3-207ENST00000467819 DOCK1Q14185 1865 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 LACTBP83111 547 aaPredicted RBP26.06■■□□□ 1.76
COL9A3-207ENST00000467819 SLC9C1Q4G0N8 1177 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 NOL9Q5SY16 702 aaKnown RBP26.06■■□□□ 1.76
COL9A3-207ENST00000467819 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 ZSCAN29Q8IWY8 852 aaPredicted RBP26.06■■□□□ 1.76
COL9A3-207ENST00000467819 IDI2Q9BXS1 227 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 KCNH4Q9UQ05 1017 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 RFX7Q2KHR2 1363 aa26.06■■□□□ 1.76
COL9A3-207ENST00000467819 GNAI2P04899 355 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 SPTY2D1Q68D10 685 aaPredicted RBP26.05■■□□□ 1.76
COL9A3-207ENST00000467819 ANKRD23Q86SG2 305 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 SLF2Q8IX21 1173 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 ZNF333Q96JL9 665 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 PTPRFP10586 1907 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 ATRNL1Q5VV63 1379 aa26.05■■□□□ 1.76
COL9A3-207ENST00000467819 PDHXO00330 501 aa26.04■■□□□ 1.76
COL9A3-207ENST00000467819 ENTPD3O75355 529 aa26.04■■□□□ 1.76
COL9A3-207ENST00000467819 EN2P19622 333 aaPredicted RBP26.04■■□□□ 1.76
COL9A3-207ENST00000467819 BTDP43251 543 aa26.04■■□□□ 1.76
COL9A3-207ENST00000467819 PICALMQ13492 652 aa26.04■■□□□ 1.76
COL9A3-207ENST00000467819 CPA4Q9UI42 421 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms