RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-206ENST00000467681 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
SSBP1-206ENST00000467681 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-206ENST00000467681 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
SSBP1-206ENST00000467681 BTDP43251 543 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 TNNI2P48788 182 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 SUPT20HL1Q3ZLR7 823 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 FAM83AQ86UY5 434 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
SSBP1-206ENST00000467681 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 ABT1Q9ULW3 272 aaKnown RBP16.55■□□□□ 0.24
SSBP1-206ENST00000467681 TLL2Q9Y6L7 1015 aa16.55■□□□□ 0.24
SSBP1-206ENST00000467681 CYP7A1P22680 504 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 NF2P35240 595 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 RHBDL3P58872 404 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 FKBP1BP68106 108 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 NBPF12Q5TAG4 269 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-206ENST00000467681 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
SSBP1-206ENST00000467681 SALL3Q9BXA9 1300 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 RASSF10A6NK89 507 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 ERC2O15083 957 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
SSBP1-206ENST00000467681 BAG3O95817 575 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 MX1P20591 662 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 NFIAQ12857 509 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 TSHZ3Q63HK5 1081 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 FAM151AQ8WW52 585 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
SSBP1-206ENST00000467681 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
SSBP1-206ENST00000467681 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
SSBP1-206ENST00000467681 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-206ENST00000467681 PDE1AP54750 535 aa16.52■□□□□ 0.24
SSBP1-206ENST00000467681 SLC9C2Q5TAH2 1124 aa16.52■□□□□ 0.24
SSBP1-206ENST00000467681 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
SSBP1-206ENST00000467681 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
SSBP1-206ENST00000467681 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.24
SSBP1-206ENST00000467681 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 ENTPD3O75355 529 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 PDE6AP16499 860 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 PLCG2P16885 1265 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 HUNKP57058 714 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 TCP10Q12799 353 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
SSBP1-206ENST00000467681 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSBP1-206ENST00000467681 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
SSBP1-206ENST00000467681 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
SSBP1-206ENST00000467681 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
SSBP1-206ENST00000467681 RGS3P49796 1198 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 TTLL12Q14166 644 aaPredicted RBP16.5■□□□□ 0.23
SSBP1-206ENST00000467681 MOB2Q70IA6 237 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
SSBP1-206ENST00000467681 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
SSBP1-206ENST00000467681 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.5■□□□□ 0.237e-14■□□□□ 9.4
SSBP1-206ENST00000467681 TCRBV5S4A2TA0A5A2 114 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 ADD2P35612 726 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 UBE3CQ15386 1083 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 LDLRAD1Q5T700 205 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 TEX11Q8IYF3 940 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
SSBP1-206ENST00000467681 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
SSBP1-206ENST00000467681 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 NEFLP07196 543 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 VEGFBP49765 207 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
SSBP1-206ENST00000467681 PRKG1Q13976 671 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 HOOK2Q96ED9 719 aa16.48■□□□□ 0.23
SSBP1-206ENST00000467681 ANGEL1Q9UNK9 670 aaKnown RBP16.48■□□□□ 0.23
SSBP1-206ENST00000467681 ECE1P42892 770 aa16.47■□□□□ 0.23
SSBP1-206ENST00000467681 RGMBQ6NW40 437 aa16.47■□□□□ 0.23
SSBP1-206ENST00000467681 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
SSBP1-206ENST00000467681 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
SSBP1-206ENST00000467681 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
SSBP1-206ENST00000467681 MAGEB6P1A0A0J9YX57 407 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.23
SSBP1-206ENST00000467681 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
SSBP1-206ENST00000467681 PICALMQ13492 652 aa16.46■□□□□ 0.23
SSBP1-206ENST00000467681 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms