RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 FARP2O94887 1054 aaPredicted RBP4.63□□□□□ -1.67
SATB1-211ENST00000467628 B3GALT4O96024 378 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 SSFA2P28290 1259 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 CDK5R2Q13319 367 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 HP1BP3Q5SSJ5 553 aaPredicted RBP4.63□□□□□ -1.67
SATB1-211ENST00000467628 GALNT12Q8IXK2 581 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 FAM181AQ8N9Y4 354 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 FAM168AQ92567 244 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 MISP3Q96FF7 219 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 CORO1BQ9BR76 489 aa4.63□□□□□ -1.67
SATB1-211ENST00000467628 FAM13AO94988 1023 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 FAM87AP0C7U9 286 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 CYP27C1Q4G0S4 372 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 USPL1Q5W0Q7 1092 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 LRRN4CLQ8ND94 238 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 NETO1Q8TDF5 533 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 WDR89Q96FK6 387 aaPredicted RBP4.62□□□□□ -1.67
SATB1-211ENST00000467628 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 ZNF576Q9H609 170 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 RC3H2Q9HBD1 1191 aaKnown RBP4.62□□□□□ -1.67
SATB1-211ENST00000467628 ZFYVE1Q9HBF4 777 aa4.62□□□□□ -1.67
SATB1-211ENST00000467628 TMEM88BA6NKF7 163 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 TMPRSS2O15393 492 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 MESP2Q0VG99 397 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 PDE3AQ14432 1141 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 TMEM40Q8WWA1 233 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 CRIM1Q9NZV1 1036 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 VAV3Q9UKW4 847 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 SYNGAP1Q96PV0 1343 aa4.61□□□□□ -1.67
SATB1-211ENST00000467628 LEFTY1O75610 366 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 LIG1P18858 919 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 ITPKAP23677 461 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 PRKCQQ04759 706 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 KIAA0319Q5VV43 1072 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 PHLDB3Q6NSJ2 640 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 CILP2Q8IUL8 1156 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 FANCD2OSQ96PS1 177 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 CCDC86Q9H6F5 360 aaKnown RBP4.6□□□□□ -1.67
SATB1-211ENST00000467628 PLAGL2Q9UPG8 496 aa4.6□□□□□ -1.67
SATB1-211ENST00000467628 ZNF862O60290 1169 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 OXCT1P55809 520 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 FKBP4Q02790 459 aaKnown RBP eCLIP4.59□□□□□ -1.67
SATB1-211ENST00000467628 KSR1Q8IVT5 923 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 PI4K2BQ8TCG2 481 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 DDX54Q8TDD1 881 aaKnown RBP4.59□□□□□ -1.67
SATB1-211ENST00000467628 ANO2Q9NQ90 1003 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 DISC1Q9NRI5 854 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.59□□□□□ -1.67
SATB1-211ENST00000467628 PCDHGC5Q9Y5F6 944 aa4.59□□□□□ -1.67
SATB1-211ENST00000467628 AP3B2Q13367 1082 aa4.58□□□□□ -1.68
SATB1-211ENST00000467628 SF3B2Q13435 895 aaKnown RBP4.58□□□□□ -1.68
SATB1-211ENST00000467628 PKN1Q16512 942 aa4.58□□□□□ -1.68
SATB1-211ENST00000467628 IFI16Q16666 785 aaKnown RBP4.58□□□□□ -1.68
SATB1-211ENST00000467628 AOC3Q16853 763 aa4.58□□□□□ -1.68
SATB1-211ENST00000467628 SMYD4Q8IYR2 804 aaPredicted RBP4.58□□□□□ -1.68
SATB1-211ENST00000467628 DUSP23Q9BVJ7 150 aa4.58□□□□□ -1.68
SATB1-211ENST00000467628 ZC3H12CQ9C0D7 883 aaKnown RBP4.58□□□□□ -1.68
SATB1-211ENST00000467628 ZNF503-AS2A6NEH8 195 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 ZNF157P51786 506 aaPredicted RBP4.57□□□□□ -1.68
SATB1-211ENST00000467628 ID3Q02535 119 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 FAAP100Q0VG06 881 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 ZNF211Q13398 564 aaPredicted RBP4.57□□□□□ -1.68
SATB1-211ENST00000467628 TTLL4Q14679 1199 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 HRASLS5Q96KN8 279 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 EHD4Q9H223 541 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 ATXN3LQ9H3M9 355 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 PIDD1Q9HB75 910 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 MKNK2Q9HBH9 465 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 ABCB6Q9NP58 842 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 PRDM7Q9NQW5 492 aa4.57□□□□□ -1.68
SATB1-211ENST00000467628 ABL1P00519 1130 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 CEACAM5P06731 702 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 PTPN12Q05209 780 aaKnown RBP4.56□□□□□ -1.68
SATB1-211ENST00000467628 ORC1Q13415 861 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 ECM1Q16610 540 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 KIF4BQ2VIQ3 1234 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 FLAD1Q8NFF5 587 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 CCDC97Q96F63 343 aaPredicted RBP4.56□□□□□ -1.68
SATB1-211ENST00000467628 FAM84AQ96KN4 292 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 SLC38A3Q99624 504 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 NPHS2Q9NP85 383 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 SERPINA10Q9UK55 444 aa4.56□□□□□ -1.68
SATB1-211ENST00000467628 CARNS1A5YM72 827 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 LRRC10BA6NIK2 292 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.55□□□□□ -1.68
SATB1-211ENST00000467628 RNGTTO60942 597 aaKnown RBP4.55□□□□□ -1.68
SATB1-211ENST00000467628 NEFMP07197 916 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 SLFN14P0C7P3 912 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 HCLS1P14317 486 aaPredicted RBP4.55□□□□□ -1.68
SATB1-211ENST00000467628 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 SLC23A3Q6PIS1 610 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 FAM214BQ7L5A3 538 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 CCER1Q8TC90 406 aaPredicted RBP4.55□□□□□ -1.68
SATB1-211ENST00000467628 HEXIM2Q96MH2 286 aaKnown RBP4.55□□□□□ -1.68
SATB1-211ENST00000467628 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 TNKS2Q9H2K2 1166 aa4.55□□□□□ -1.68
SATB1-211ENST00000467628 TMEM265A0A087WTH1 108 aa4.54□□□□□ -1.68
SATB1-211ENST00000467628 TMEM238LA0A1B0GVL6 79 aa4.54□□□□□ -1.68
SATB1-211ENST00000467628 GSTP1P09211 210 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms