RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 PTPRFP10586 1907 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 FGFR2P21802 821 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 SH3TC2Q8TF17 1288 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 ZNF112Q9UJU3 913 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
PTPDC1-203ENST00000467049 HOXD10P28358 340 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 BCAMP50895 628 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 NOL9Q5SY16 702 aaKnown RBP11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 SRRDQ9UH36 339 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 PTPRCP08575 1304 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
PTPDC1-203ENST00000467049 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 H0YGN5 161 aa11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 SLC5A1P13866 664 aa11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 INPP5BP32019 993 aa11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 SHISA4Q96DD7 197 aa11.22□□□□□ -0.61
PTPDC1-203ENST00000467049 PDHXO00330 501 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 OSBPP22059 807 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 CTGFP29279 349 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 PSMC4P43686 418 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 MOGSQ13724 837 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 CPA4Q9UI42 421 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.61
PTPDC1-203ENST00000467049 EYA2O00167 538 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 ZBTB22O15209 634 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 ANP32CO43423 234 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 CDC42EP5Q6NZY7 148 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 MIGA2Q7L4E1 593 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 RAET1EQ8TD07 263 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 LPIN2Q92539 896 aa11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.62
PTPDC1-203ENST00000467049 MYPNQ86TC9 1320 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 CXCL11O14625 94 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 GRK4P32298 578 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 MTFR1Q15390 333 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 POTEHQ6S545 545 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
PTPDC1-203ENST00000467049 GJB1P08034 283 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 BCRP11274 1271 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 CAPN2P17655 700 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 GJA8P48165 433 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 UBXN2AP68543 259 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 UBE2Q1Q7Z7E8 422 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 SEMA3EO15041 775 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 CCL5P13501 91 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 FCGRTP55899 365 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 ATRNL1Q5VV63 1379 aa11.19□□□□□ -0.62
PTPDC1-203ENST00000467049 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 RFX7Q2KHR2 1363 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 CIAO1O76071 339 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 TCP10Q12799 353 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 NFIAQ12857 509 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 DIXDC1Q155Q3 683 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 ATG9AQ7Z3C6 839 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 ATAD5Q96QE3 1844 aa11.18□□□□□ -0.62
PTPDC1-203ENST00000467049 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 A0A0G2JLL6 359 aaPredicted RBP11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 ENTPD3O75355 529 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 PRDX5P30044 214 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 PRRT2Q7Z6L0 340 aaPredicted RBP11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 DPF3Q92784 378 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 CEP290O15078 2479 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 LOC285556D6RIA3 1793 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 PRKCZQ05513 592 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 ZGPATQ8N5A5 531 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms