RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 LDHCP07864 332 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 TNNI2P48788 182 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 HUNKP57058 714 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 DEFB115Q30KQ5 88 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 NBPF12Q5TAG4 269 aaPredicted RBP14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 NOL10Q9BSC4 688 aaKnown RBP14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
SHROOM3-202ENST00000466541 UBE2Q2LH0YL09 131 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 ZBTB22O15209 634 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 MAP4K4O95819 1239 aaPredicted RBP14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 ATP5JP18859 108 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 CYP7A1P22680 504 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 PICALMQ13492 652 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 CDAN1Q8IWY9 1227 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 DNAJC5GQ8N7S2 189 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 LNPKQ9C0E8 428 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 PAG1Q9NWQ8 432 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
SHROOM3-202ENST00000466541 VEGFBP49765 207 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 MAP3K12Q12852 859 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 NFIAQ12857 509 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 TTF1Q15361 905 aaPredicted RBP14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 CYP4F22Q6NT55 531 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 SAPCD2Q86UD0 394 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 KLRG1Q96E93 195 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 AATFQ9NY61 560 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 ANGEL1Q9UNK9 670 aaKnown RBP14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 GAKO14976 1311 aa14.63□□□□□ -0.07
SHROOM3-202ENST00000466541 MAST2Q6P0Q8 1798 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 SUPT20HL1Q3ZLR7 823 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 ADGRA1Q86SQ6 560 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 MIGA1Q8NAN2 632 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 HAUS7Q99871 368 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 PPP2R3BQ9Y5P8 575 aa14.62□□□□□ -0.07
SHROOM3-202ENST00000466541 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 GPR75-ASB3A0A0A6YYF3 556 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 MX1P20591 662 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 RGS3P49796 1198 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 ZNF157P51786 506 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 SLC9C2Q5TAH2 1124 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 ZFPM1Q8IX07 1006 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 FAM163AQ96GL9 167 aaPredicted RBP14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 CAPNS2Q96L46 248 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 DOCK2Q92608 1830 aa14.61□□□□□ -0.07
SHROOM3-202ENST00000466541 RASSF10A6NK89 507 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 PPP1R12BO60237 982 aaPredicted RBP14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 BAG3O95817 575 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 SLFNL1Q499Z3 407 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 MIGA2Q7L4E1 593 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 ARMC9Q7Z3E5 817 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
SHROOM3-202ENST00000466541 MYH7P12883 1935 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 ERC2O15083 957 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 AOC2O75106 756 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 NEFLP07196 543 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 PDE6AP16499 860 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 RHBDL3P58872 404 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 MKRN3Q13064 507 aaKnown RBP14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 RGMBQ6NW40 437 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 FAM83AQ86UY5 434 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 FAM151AQ8WW52 585 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 DDX4Q9NQI0 724 aaKnown RBP14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 ZNF532Q9HCE3 1301 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 PCNTO95613 3336 aa14.59□□□□□ -0.07
SHROOM3-202ENST00000466541 WDHD1O75717 1129 aaPredicted RBP14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 CHGBP05060 677 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 PLCG2P16885 1265 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 ECE1P42892 770 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 NUCB1Q02818 461 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 FKBP1CQ5VVH2 108 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 SSC5DA1L4H1 1573 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
SHROOM3-202ENST00000466541 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 MAGEB6P1A0A0J9YX57 407 aa14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 USP5P45974 858 aa14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 FKBP1BP68106 108 aa14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms