RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SCARF1Q14162 830 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 PAG1Q9NWQ8 432 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
PMF1-204ENST00000466489 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 AOX1Q06278 1338 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 GOLIM4O00461 696 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 WNT10BO00744 389 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
PMF1-204ENST00000466489 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 TNNI2P48788 182 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
PMF1-204ENST00000466489 ZSCAN25Q6NSZ9 544 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 CDC37L1Q7L3B6 337 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 HAUS7Q99871 368 aa11.98□□□□□ -0.49
PMF1-204ENST00000466489 ST18O60284 1047 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 BAG3O95817 575 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 PLCG2P16885 1265 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 MECOMQ03112 1051 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 ANGEL2Q5VTE6 544 aaKnown RBP11.97□□□□□ -0.49
PMF1-204ENST00000466489 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 KRT26Q7Z3Y9 468 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
PMF1-204ENST00000466489 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 TRAK2O60296 914 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
PMF1-204ENST00000466489 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 NF2P35240 595 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.49
PMF1-204ENST00000466489 PDE1AP54750 535 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
PMF1-204ENST00000466489 C1QTNF8P60827 252 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
PMF1-204ENST00000466489 NSUN4Q96CB9 384 aaKnown RBP11.96□□□□□ -0.49
PMF1-204ENST00000466489 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
PMF1-204ENST00000466489 GAKO14976 1311 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 EGFRP00533 1210 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 CYP7A1P22680 504 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 GRIK5Q16478 980 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 MAGEB6Q8N7X4 407 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
PMF1-204ENST00000466489 ZBED3Q96IU2 234 aaPredicted RBP11.95□□□□□ -0.5
PMF1-204ENST00000466489 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
PMF1-204ENST00000466489 PIH1D3Q9NQM4 214 aaKnown RBP11.95□□□□□ -0.5
PMF1-204ENST00000466489 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
PMF1-204ENST00000466489 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
PMF1-204ENST00000466489 SEC24BO95487 1268 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
PMF1-204ENST00000466489 MCCP23508 829 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 BTDP43251 543 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 SLC9C2Q5TAH2 1124 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 FSD1Q9BTV5 496 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 SLKQ9H2G2 1235 aaPredicted RBP11.94□□□□□ -0.5
PMF1-204ENST00000466489 TDRD3Q9H7E2 651 aaKnown RBP11.94□□□□□ -0.5
PMF1-204ENST00000466489 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
PMF1-204ENST00000466489 NDUFB9Q9Y6M9 179 aa11.94□□□□□ -0.5
PMF1-204ENST00000466489 SALL3Q9BXA9 1300 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 GPR75-ASB3A0A0A6YYF3 556 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 FSD2A1L4K1 749 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 APOBEC3HQ6NTF7 200 aaKnown RBP11.93□□□□□ -0.5
PMF1-204ENST00000466489 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 TICAM2Q86XR7 235 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 PI4K2BQ8TCG2 481 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 OTUD7AQ8TE49 926 aaPredicted RBP11.93□□□□□ -0.5
PMF1-204ENST00000466489 EVI5LQ96CN4 794 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
PMF1-204ENST00000466489 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
PMF1-204ENST00000466489 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
PMF1-204ENST00000466489 PDE6AP16499 860 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 FAM83AQ86UY5 434 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
PMF1-204ENST00000466489 AATFQ9NY61 560 aaKnown RBP eCLIP11.92□□□□□ -0.5
PMF1-204ENST00000466489 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 FOCADQ5VW36 1801 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
PMF1-204ENST00000466489 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
PMF1-204ENST00000466489 ANAPC15P60006 121 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms