RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 LRP6O75581 1613 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ZBTB43O43298 467 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 CAVIN2O95810 425 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 SLC5A1P13866 664 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 FGFR2P21802 821 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
UFD1-206ENST00000466373 TACC3Q9Y6A5 838 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 MROH5Q6ZUA9 1318 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 SLIT2O94813 1529 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 KRT40Q6A162 431 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 CMTR1Q8N1G2 835 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 WTIPA6NIX2 430 aaPredicted RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 ZNF202O95125 648 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 IGDCC4Q8TDY8 1250 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
UFD1-206ENST00000466373 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 DISP2A7MBM2 1401 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 A0A1W2PQ27 194 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 A0A1W2PQ64 194 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 YEATS4O95619 227 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
UFD1-206ENST00000466373 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 LY9Q9HBG7 655 aa12.09□□□□□ -0.47
UFD1-206ENST00000466373 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 PFKFB1P16118 471 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 TDO2P48775 406 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 CPLX2Q6PUV4 134 aaKnown RBP12.08□□□□□ -0.48
UFD1-206ENST00000466373 UBE2Q2Q8WVN8 375 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 CLIC6Q96NY7 704 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 LRP2BPQ9P2M1 347 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 SLC12A7Q9Y666 1083 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
UFD1-206ENST00000466373 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 KCNQ4P56696 695 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 DDB1Q16531 1140 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 NAT10Q9H0A0 1025 aaKnown RBP12.07□□□□□ -0.48
UFD1-206ENST00000466373 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
UFD1-206ENST00000466373 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 ATRNO75882 1429 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 CDKL5O76039 1030 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 ITPK1Q13572 414 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 LRRC8AQ8IWT6 810 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
UFD1-206ENST00000466373 SIK1P57059 783 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 NTRK3Q16288 839 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 TPD52L1Q16890 204 aaPredicted RBP12.07□□□□□ -0.48
UFD1-206ENST00000466373 SPECC1Q5M775 1068 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 MRFAP1L1Q96HT8 127 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
UFD1-206ENST00000466373 TRIM29Q14134 588 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 SLC39A14Q15043 492 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 SDR42E1Q8WUS8 393 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 ZNF592Q92610 1267 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 C4AP0C0L4 1744 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 USP27XA6NNY8 438 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 SMC2O95347 1197 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 CHRNDQ07001 517 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 AKNAD1Q5T1N1 836 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
UFD1-206ENST00000466373 SKILP12757 684 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 TNNT1P13805 278 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms