RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 IQSEC3Q9UPP2 1182 aaPredicted RBP18.32■□□□□ 0.52
CXCR4-203ENST00000466288 NR2E3Q9Y5X4 410 aa18.32■□□□□ 0.52
CXCR4-203ENST00000466288 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
CXCR4-203ENST00000466288 VAMP4O75379 141 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
CXCR4-203ENST00000466288 MOGSQ13724 837 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 TBC1D22AQ8WUA7 517 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 KCNH4Q9UQ05 1017 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 IL16Q14005 1332 aa18.31■□□□□ 0.52
CXCR4-203ENST00000466288 INPP5BP32019 993 aa18.3■□□□□ 0.52
CXCR4-203ENST00000466288 MIGA2Q7L4E1 593 aa18.3■□□□□ 0.52
CXCR4-203ENST00000466288 ZNF341Q9BYN7 854 aa18.3■□□□□ 0.52
CXCR4-203ENST00000466288 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
CXCR4-203ENST00000466288 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
CXCR4-203ENST00000466288 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
CXCR4-203ENST00000466288 A0A1W2PPC1 479 aa18.29■□□□□ 0.52
CXCR4-203ENST00000466288 UBXN2AP68543 259 aa18.29■□□□□ 0.52
CXCR4-203ENST00000466288 PRKCZQ05513 592 aa18.29■□□□□ 0.52
CXCR4-203ENST00000466288 VPS37DQ86XT2 251 aa18.29■□□□□ 0.52
CXCR4-203ENST00000466288 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
CXCR4-203ENST00000466288 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
CXCR4-203ENST00000466288 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
CXCR4-203ENST00000466288 BCRP11274 1271 aa18.28■□□□□ 0.52
CXCR4-203ENST00000466288 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
CXCR4-203ENST00000466288 BIN2Q9UBW5 565 aaPredicted RBP18.28■□□□□ 0.52
CXCR4-203ENST00000466288 ZNF112Q9UJU3 913 aa18.28■□□□□ 0.52
CXCR4-203ENST00000466288 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
CXCR4-203ENST00000466288 SGPL1O95470 568 aa18.27■□□□□ 0.52
CXCR4-203ENST00000466288 UNC93B1Q9H1C4 597 aa18.27■□□□□ 0.52
CXCR4-203ENST00000466288 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
CXCR4-203ENST00000466288 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.51
CXCR4-203ENST00000466288 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
CXCR4-203ENST00000466288 GPAT2Q6NUI2 795 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 SLAIN1Q8ND83 568 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 SUGT1Q9Y2Z0 365 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 FCGRTP55899 365 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 HHIPL2Q6UWX4 724 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 FAM151AQ8WW52 585 aa18.26■□□□□ 0.51
CXCR4-203ENST00000466288 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
CXCR4-203ENST00000466288 CYP2C8P10632 490 aa18.25■□□□□ 0.51
CXCR4-203ENST00000466288 BCAMP50895 628 aa18.25■□□□□ 0.51
CXCR4-203ENST00000466288 LRRC24Q50LG9 513 aa18.25■□□□□ 0.51
CXCR4-203ENST00000466288 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
CXCR4-203ENST00000466288 MAST3O60307 1309 aa18.24■□□□□ 0.51
CXCR4-203ENST00000466288 EVI5O60447 810 aa18.24■□□□□ 0.51
CXCR4-203ENST00000466288 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
CXCR4-203ENST00000466288 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
CXCR4-203ENST00000466288 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
CXCR4-203ENST00000466288 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
CXCR4-203ENST00000466288 STAP2Q9UGK3 403 aa18.24■□□□□ 0.51
CXCR4-203ENST00000466288 CXCL11O14625 94 aa18.23■□□□□ 0.51
CXCR4-203ENST00000466288 PDE8BO95263 885 aa18.23■□□□□ 0.51
CXCR4-203ENST00000466288 METTL24Q5JXM2 366 aa18.23■□□□□ 0.51
CXCR4-203ENST00000466288 ADCY3O60266 1144 aa18.22■□□□□ 0.51
CXCR4-203ENST00000466288 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
CXCR4-203ENST00000466288 TCP10Q12799 353 aa18.22■□□□□ 0.51
CXCR4-203ENST00000466288 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
CXCR4-203ENST00000466288 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
CXCR4-203ENST00000466288 INHAP05111 366 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 ELNP15502 786 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 CAPN2P17655 700 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 FLT3LGP49771 235 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 NFIAQ12857 509 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
CXCR4-203ENST00000466288 CDC42EP5Q6NZY7 148 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
CXCR4-203ENST00000466288 TFRCP02786 760 aaKnown RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 PAK6Q9NQU5 681 aaPredicted RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 UTYO14607 1347 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 A0A0G2JLL6 359 aaPredicted RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 FGFR2P21802 821 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 MNX1P50219 401 aaPredicted RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 IRF5Q13568 498 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 PRRT2Q7Z6L0 340 aaPredicted RBP18.2■□□□□ 0.5
CXCR4-203ENST00000466288 DAGLAQ9Y4D2 1042 aa18.2■□□□□ 0.5
CXCR4-203ENST00000466288 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
CXCR4-203ENST00000466288 GDF15Q99988 308 aa18.19■□□□□ 0.5
CXCR4-203ENST00000466288 LAMA2P24043 3122 aaKnown RBP18.18■□□□□ 0.5
CXCR4-203ENST00000466288 CUL9Q8IWT3 2517 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 PHF20L1A8MW92 1017 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 BMP8BP34820 402 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 DIXDC1Q155Q3 683 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 FASTKD5Q7L8L6 764 aaKnown RBP18.18■□□□□ 0.5
CXCR4-203ENST00000466288 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
CXCR4-203ENST00000466288 PAWRQ96IZ0 340 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms