RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 ZIC5Q96T25 663 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 NOP58Q9Y2X3 529 aaKnown RBP8.08□□□□□ -1.12
SFPQ-203ENST00000466213 KNSTRNQ9Y448 316 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.08□□□□□ -1.12
SFPQ-203ENST00000466213 DCCP43146 1447 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 NWD1Q149M9 1564 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 KIF7Q2M1P5 1343 aa8.08□□□□□ -1.12
SFPQ-203ENST00000466213 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
SFPQ-203ENST00000466213 ST13P50502 369 aaKnown RBP8.07□□□□□ -1.12
SFPQ-203ENST00000466213 ARSDP51689 593 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 POU4F2Q12837 409 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 DDX10Q13206 875 aaKnown RBP8.07□□□□□ -1.12
SFPQ-203ENST00000466213 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
SFPQ-203ENST00000466213 ZNF438Q7Z4V0 828 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 CNPY4Q8N129 248 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 C1orf127Q8N9H9 656 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 BCO2Q9BYV7 579 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 SLC12A5Q9H2X9 1139 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 FAM8A1Q9UBU6 413 aa8.07□□□□□ -1.12
SFPQ-203ENST00000466213 CCDC7Q96M83 1385 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 DISP3Q9P2K9 1392 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 EREGO14944 169 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 SPINT1O43278 529 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 PHACTR2O75167 634 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 PPFIA4O75335 1185 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 ATF4P18848 351 aaPredicted RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 HIF1AQ16665 826 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 FOXD4L6Q3SYB3 417 aaPredicted RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 FOXD4L3Q6VB84 417 aaPredicted RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 ANKARQ7Z5J8 1434 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 CCAR1Q8IX12 1150 aaKnown RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
SFPQ-203ENST00000466213 XRN1Q8IZH2 1706 aaKnown RBP8.06□□□□□ -1.12
SFPQ-203ENST00000466213 SETD1AO15047 1707 aaKnown RBP8.05□□□□□ -1.12
SFPQ-203ENST00000466213 KNDC1Q76NI1 1749 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 POTECB2RU33 542 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 C11orf95C9JLR9 678 aaPredicted RBP8.05□□□□□ -1.12
SFPQ-203ENST00000466213 SMPD1P17405 629 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 MAP3K10Q02779 954 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 ORAI2Q96SN7 254 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 PANK3Q9H999 370 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 NPHP3Q7Z494 1330 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
SFPQ-203ENST00000466213 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 GDF9O60383 454 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 NEFMP07197 916 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 GRM2Q14416 872 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 NBPF10Q6P3W6 841 aaKnown RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 KRT28Q7Z3Y7 464 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 GPC6Q9Y625 555 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 ACEP12821 1306 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 KTN1Q86UP2 1357 aaKnown RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 QRICH2Q9H0J4 1663 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 C1orf167Q5SNV9 1468 aa8.04□□□□□ -1.12
SFPQ-203ENST00000466213 ARHGEF28Q8N1W1 1705 aaKnown RBP8.04□□□□□ -1.12
SFPQ-203ENST00000466213 SH3BP5O60239 455 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 PMM1Q92871 262 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 KBTBD4Q9NVX7 518 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 TULP4Q9NRJ4 1543 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 CGNL1Q0VF96 1302 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 TYRO3Q06418 890 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 BRINP3Q76B58 766 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 C3orf58Q8NDZ4 430 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 HPS1Q92902 700 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 LRRC59Q96AG4 307 aaKnown RBP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
SFPQ-203ENST00000466213 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 ZSWIM4Q9H7M6 989 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 ANKIB1Q9P2G1 1089 aa8.03□□□□□ -1.12
SFPQ-203ENST00000466213 PRR36Q9H6K5 1346 aa8.02□□□□□ -1.12
SFPQ-203ENST00000466213 LTBP4Q8N2S1 1624 aa8.02□□□□□ -1.12
SFPQ-203ENST00000466213 CDC42BPGQ6DT37 1551 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 ANP32CO43423 234 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
SFPQ-203ENST00000466213 MSX1P28360 303 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 ZFYVE27Q5T4F4 411 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 GPRASP2Q96D09 838 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
SFPQ-203ENST00000466213 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
SFPQ-203ENST00000466213 MAF1Q9H063 256 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms