RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 SHHQ15465 462 aa7.46□□□□□ -1.22
KDM3A-209ENST00000466058 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
KDM3A-209ENST00000466058 MTHFSDQ2M296 383 aaKnown RBP7.46□□□□□ -1.22
KDM3A-209ENST00000466058 DDX46Q7L014 1031 aaKnown RBP7.46□□□□□ -1.22
KDM3A-209ENST00000466058 GRAPLQ8TC17 118 aaPredicted RBP7.46□□□□□ -1.22
KDM3A-209ENST00000466058 UIMC1Q96RL1 719 aa7.46□□□□□ -1.22
KDM3A-209ENST00000466058 LBHD1Q9BQE6 289 aaPredicted RBP7.46□□□□□ -1.22
KDM3A-209ENST00000466058 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
KDM3A-209ENST00000466058 NBPF3Q9H094 633 aa7.46□□□□□ -1.22
KDM3A-209ENST00000466058 ANKRD36CQ5JPF3 1778 aa7.46□□□□□ -1.22
KDM3A-209ENST00000466058 LRRC37AA6NMS7 1700 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 GPR37L1O60883 481 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
KDM3A-209ENST00000466058 C9orf50Q5SZB4 431 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 APOBEC3FQ8IUX4 373 aaKnown RBP7.45□□□□□ -1.22
KDM3A-209ENST00000466058 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
KDM3A-209ENST00000466058 OXER1Q8TDS5 423 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 TESK2Q96S53 571 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 PHOX2BQ99453 314 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 EYA3Q99504 573 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 ZBTB3Q9H5J0 574 aa7.45□□□□□ -1.22
KDM3A-209ENST00000466058 SIPA1L3O60292 1781 aaPredicted RBP7.45□□□□□ -1.22
KDM3A-209ENST00000466058 DOCK3Q8IZD9 2030 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 USP2O75604 605 aaPredicted RBP7.44□□□□□ -1.22
KDM3A-209ENST00000466058 HMOX1P09601 288 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 BMP1P13497 986 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 IREB2P48200 963 aaKnown RBP7.44□□□□□ -1.22
KDM3A-209ENST00000466058 TTLL7Q6ZT98 887 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 FBXW7Q969H0 707 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 ZNF428Q96B54 188 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 FBXL18Q96ME1 805 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
KDM3A-209ENST00000466058 PAK6Q9NQU5 681 aaPredicted RBP7.44□□□□□ -1.22
KDM3A-209ENST00000466058 BTBD19C9JJ37 291 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 IRF6O14896 467 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 KCNQ1P51787 676 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 GTF2A2P52657 109 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 SMAD3P84022 425 aaKnown RBP7.43□□□□□ -1.22
KDM3A-209ENST00000466058 TFF2Q03403 129 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 AMHR2Q16671 573 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 LRRC26Q2I0M4 334 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 NBPF12Q5TAG4 269 aaPredicted RBP7.43□□□□□ -1.22
KDM3A-209ENST00000466058 C17orf99Q6UX52 265 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 TBC1D16Q8TBP0 767 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 NECTIN2Q92692 538 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 FAM117AQ9C073 453 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.22
KDM3A-209ENST00000466058 PFASO15067 1338 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 ADGRA2Q96PE1 1338 aa7.43□□□□□ -1.22
KDM3A-209ENST00000466058 USP17L3A6NCW0 530 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 USP17L4A6NCW7 530 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 HIC1Q14526 733 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 USP17L1Q7RTZ2 530 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 OGFOD1Q8N543 542 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 ANKLE1Q8NAG6 615 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 IL17REQ8NFR9 667 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 CELF1Q92879 486 aaKnown RBP7.42□□□□□ -1.22
KDM3A-209ENST00000466058 MAP3K15Q6ZN16 1313 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 IBTKQ9P2D0 1353 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-209ENST00000466058 CHD8Q9HCK8 2581 aa7.42□□□□□ -1.22
KDM3A-209ENST00000466058 ZFHX4Q86UP3 3567 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 COL4A1P02462 1669 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 DCHS1Q96JQ0 3298 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 ERVV-1B6SEH8 477 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 TK2O00142 265 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 UFL1O94874 794 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 SNRPA1P09661 255 aaKnown RBP7.41□□□□□ -1.22
KDM3A-209ENST00000466058 CAPN2P17655 700 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 PTPREP23469 700 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 FLT3LGP49771 235 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 SLC10A5Q5PT55 438 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 KIF6Q6ZMV9 814 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 ZNF34Q8IZ26 560 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-209ENST00000466058 SIN3AQ96ST3 1273 aa7.41□□□□□ -1.22
KDM3A-209ENST00000466058 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-209ENST00000466058 UTP14AQ9BVJ6 771 aaKnown RBP7.41□□□□□ -1.22
KDM3A-209ENST00000466058 RRP7AQ9Y3A4 280 aaKnown RBP7.41□□□□□ -1.22
KDM3A-209ENST00000466058 CFAP47Q6ZTR5 3102 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 CLRN2A0PK11 232 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 IGFBP4P22692 258 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 FCGRTP55899 365 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 SUPT20HL1Q3ZLR7 823 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 TMC4Q7Z404 712 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 KCNK17Q96T54 332 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 ZMYND15Q9H091 742 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 PRDM12Q9H4Q4 367 aa7.4□□□□□ -1.22
KDM3A-209ENST00000466058 LTBP2Q14767 1821 aa7.4□□□□□ -1.23
KDM3A-209ENST00000466058 CHD9Q3L8U1 2897 aa7.4□□□□□ -1.23
KDM3A-209ENST00000466058 EPG5Q9HCE0 2579 aa7.39□□□□□ -1.23
KDM3A-209ENST00000466058 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
KDM3A-209ENST00000466058 MYL6BP14649 208 aa7.39□□□□□ -1.23
KDM3A-209ENST00000466058 ADGRD1Q6QNK2 874 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms