RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 AHDC1Q5TGY3 1603 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 LRPPRCP42704 1394 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 NAA30Q147X3 362 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 BRINP3Q76B58 766 aa6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 DCCP43146 1447 aa6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 USP32Q8NFA0 1604 aa6.98□□□□□ -1.29
EXOSC3-204ENST00000465860 LOC102724428A0A0B4J2F2 783 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 J3QW42 95 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 PSAPP07602 524 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 ATF3P18847 181 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 SIK1P57059 783 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 TRIP4Q15650 581 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 CDC42BPGQ6DT37 1551 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 WFDC8Q8IUA0 241 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 DTWD1Q8N5C7 304 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 CLP1Q92989 425 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 ORAI2Q96SN7 254 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 USP21Q9UK80 565 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 C1orf167Q5SNV9 1468 aa6.97□□□□□ -1.29
EXOSC3-204ENST00000465860 DISP3Q9P2K9 1392 aa6.96□□□□□ -1.29
EXOSC3-204ENST00000465860 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.29
EXOSC3-204ENST00000465860 SAFB2Q14151 953 aaKnown RBP eCLIP6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 PBXIP1Q96AQ6 731 aa6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 PLD4Q96BZ4 506 aa6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 NSUN5Q96P11 429 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 TRPM1Q7Z4N2 1603 aa6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 SHPRHQ149N8 1683 aa6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 DLC1Q96QB1 1528 aa6.96□□□□□ -1.3
EXOSC3-204ENST00000465860 LRP6O75581 1613 aa6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 PTCD1O75127 700 aaKnown RBP6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 HOXD8P13378 290 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 ZMYM1Q5SVZ6 1142 aa6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 NLRP13Q86W25 1043 aa6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 CCDC97Q96F63 343 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
EXOSC3-204ENST00000465860 DEAF1O75398 565 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 SOX18P35713 384 aa6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 PRAM1Q96QH2 718 aa6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 RGS17Q9UGC6 210 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
EXOSC3-204ENST00000465860 ZBTB39O15060 712 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 GHRHP01286 108 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 ZAP70P43403 619 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 NBPF8Q3BBV2 869 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 PRSS36Q5K4E3 855 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 PIK3R5Q8WYR1 880 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 HIRIP3Q9BW71 556 aaPredicted RBP6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 STIM2Q9P246 746 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 SERPINA10Q9UK55 444 aa6.93□□□□□ -1.3
EXOSC3-204ENST00000465860 PXDNQ92626 1479 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 XPCQ01831 940 aaPredicted RBP6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 GDF6Q6KF10 455 aaPredicted RBP6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 GPR152Q8TDT2 470 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 WFDC12Q8WWY7 111 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 PCGF6Q9BYE7 350 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 FAM13BQ9NYF5 915 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 SEPT3Q9UH03 358 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 QRICH2Q9H0J4 1663 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
EXOSC3-204ENST00000465860 DLL1O00548 723 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 NOS3P29474 1203 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 IREB2P48200 963 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 JCADQ9P266 1359 aa6.91□□□□□ -1.3
EXOSC3-204ENST00000465860 KIF1AQ12756 1690 aa6.9□□□□□ -1.3
EXOSC3-204ENST00000465860 TOPAZ1Q8N9V7 1692 aa6.9□□□□□ -1.3
EXOSC3-204ENST00000465860 TRPM3Q9HCF6 1732 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-204ENST00000465860 RBSNQ9H1K0 784 aa6.9□□□□□ -1.3
EXOSC3-204ENST00000465860 POGKQ9P215 609 aa6.9□□□□□ -1.3
EXOSC3-204ENST00000465860 PNPLA6Q8IY17 1366 aa6.9□□□□□ -1.31
EXOSC3-204ENST00000465860 COL22A1Q8NFW1 1626 aaPredicted RBP6.9□□□□□ -1.31
EXOSC3-204ENST00000465860 ABCA3Q99758 1704 aa6.9□□□□□ -1.31
EXOSC3-204ENST00000465860 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 ATP7BP35670 1465 aa6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 TULP4Q9NRJ4 1543 aa6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 MARF1Q9Y4F3 1742 aaKnown RBP6.89□□□□□ -1.31
EXOSC3-204ENST00000465860 ITSN1Q15811 1721 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 CRYBG1Q9Y4K1 1723 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 ALS2Q96Q42 1657 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 SCNN1AP37088 669 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 ATP11AP98196 1134 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms