RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 FCGRTP55899 365 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 PPIL2Q13356 520 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
USP39-212ENST00000465514 G2E3Q7L622 706 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 ZKSCAN4Q969J2 545 aaPredicted RBP12.43□□□□□ -0.42
USP39-212ENST00000465514 FAM161BQ96MY7 647 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 UBE2OQ9C0C9 1292 aaKnown RBP12.43□□□□□ -0.42
USP39-212ENST00000465514 ANKRD2Q9GZV1 360 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
USP39-212ENST00000465514 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
USP39-212ENST00000465514 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 NEURL1BA8MQ27 555 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 SNAP23O00161 211 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 PDHXO00330 501 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
USP39-212ENST00000465514 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 PAK6Q9NQU5 681 aaPredicted RBP12.42□□□□□ -0.42
USP39-212ENST00000465514 RAPGEFL1Q9UHV5 662 aa12.42□□□□□ -0.42
USP39-212ENST00000465514 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
USP39-212ENST00000465514 H7C1W4 665 aa12.41□□□□□ -0.42
USP39-212ENST00000465514 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
USP39-212ENST00000465514 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
USP39-212ENST00000465514 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
USP39-212ENST00000465514 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
USP39-212ENST00000465514 IL1R1P14778 569 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 CAPN2P17655 700 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 CHRNDQ07001 517 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 ZNF804AQ7Z570 1209 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 PTPRFP10586 1907 aa12.4□□□□□ -0.42
USP39-212ENST00000465514 IL16Q14005 1332 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 BCRP11274 1271 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 ITGA6P23229 1130 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 TNNI2P48788 182 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 FLT3LGP49771 235 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 GCKRQ14397 625 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 FAM109BQ6ICB4 259 aaPredicted RBP12.39□□□□□ -0.43
USP39-212ENST00000465514 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
USP39-212ENST00000465514 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
USP39-212ENST00000465514 TAF5LO75529 589 aa12.38□□□□□ -0.43
USP39-212ENST00000465514 PPATQ06203 517 aa12.38□□□□□ -0.43
USP39-212ENST00000465514 FLIIQ13045 1269 aa12.38□□□□□ -0.43
USP39-212ENST00000465514 C15orf52Q6ZUT6 534 aaKnown RBP12.38□□□□□ -0.43
USP39-212ENST00000465514 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
USP39-212ENST00000465514 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
USP39-212ENST00000465514 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
USP39-212ENST00000465514 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP39-212ENST00000465514 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
USP39-212ENST00000465514 CYP2C8P10632 490 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 PLA2G5P39877 138 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 CACNB3P54284 484 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
USP39-212ENST00000465514 MOGSQ13724 837 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 POLA2Q14181 598 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 ANKLE1Q8NAG6 615 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 PLA2G12BQ9BX93 195 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
USP39-212ENST00000465514 CSF1RP07333 972 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 CRKP46108 304 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 CASP7P55210 303 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 IRF5Q13568 498 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
USP39-212ENST00000465514 NCOR1O75376 2440 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
USP39-212ENST00000465514 MAST2Q6P0Q8 1798 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 TNPO2O14787 897 aaKnown RBP12.35□□□□□ -0.43
USP39-212ENST00000465514 VAMP4O75379 141 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 INPP5BP32019 993 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
USP39-212ENST00000465514 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
USP39-212ENST00000465514 CDX2Q99626 313 aaPredicted RBP12.35□□□□□ -0.43
USP39-212ENST00000465514 C11orf49Q9H6J7 331 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
USP39-212ENST00000465514 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
USP39-212ENST00000465514 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
USP39-212ENST00000465514 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
USP39-212ENST00000465514 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
USP39-212ENST00000465514 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
USP39-212ENST00000465514 BDP1A6H8Y1 2624 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms