RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CHRNDQ07001 517 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 PARP10Q53GL7 1025 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 STK11IPQ8N1F8 1099 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 LCORLQ8N3X6 602 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 BCORQ6W2J9 1755 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 GSG1L2A8MUP6 293 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 KIF23Q02241 960 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 NAPBQ9H115 298 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 LY9Q9HBG7 655 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 ZSWIM5Q9P217 1185 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 COL5A3P25940 1745 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 PTGS1P23219 599 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 IQCB1Q15051 598 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 GLIPR1L2Q4G1C9 344 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 C3orf67Q6ZVT6 689 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 NRBP1Q9UHY1 535 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 SPATA31A5Q5VU36 1347 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 SPATA31A7Q8IWB4 1347 aa21.79■■□□□ 1.08
TSPAN4-210ENST00000464987 TOM1O60784 492 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 NDUFA8P51970 172 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 STK38Q15208 465 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 ADALQ6DHV7 355 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 FMR1NBQ8N0W7 255 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 MIGA1Q8NAN2 632 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 TRIM5Q9C035 493 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 ALX1Q15699 326 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 PLA2G4DQ86XP0 818 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 MRPS27Q92552 414 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 ALG1Q9BT22 464 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 FAM217BQ9NTX9 383 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 POLR3EQ9NVU0 708 aa21.78■■□□□ 1.08
TSPAN4-210ENST00000464987 A0A1B0GUL6 1792 aa21.77■■□□□ 1.08
TSPAN4-210ENST00000464987 BCL9LQ86UU0 1499 aa21.77■■□□□ 1.08
TSPAN4-210ENST00000464987 RANBP6O60518 1105 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-210ENST00000464987 FBXW7Q969H0 707 aa21.77■■□□□ 1.08
TSPAN4-210ENST00000464987 CTAGE5O15320 804 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 ZNF75DP51815 510 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 TERF1P54274 439 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 NTRK3Q16288 839 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 TMEM67Q5HYA8 995 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 NFXL1Q6ZNB6 911 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 UQCRHLA0A096LP55 91 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 SPTLC2O15270 562 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 UQCRHP07919 91 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 SF3A1Q15459 793 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 DNTTIP2Q5QJE6 756 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 ADGRA1Q86SQ6 560 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 TMEM87BQ96K49 555 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 ZKSCAN3Q9BRR0 538 aa21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 CICQ96RK0 1608 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-210ENST00000464987 ZBTB43O43298 467 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 STX1AQ16623 288 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 ERFEQ4G0M1 354 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 BRAPQ7Z569 592 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 KIAA1524Q8TCG1 905 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 SLC4A4Q9Y6R1 1079 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 RRP12Q5JTH9 1297 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 KRT40Q6A162 431 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 CCDC186Q7Z3E2 898 aa21.75■■□□□ 1.07
TSPAN4-210ENST00000464987 YEATS4O95619 227 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 GYG1P46976 350 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 ANO1Q5XXA6 986 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 VPS37DQ86XT2 251 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 LINC00116Q8NCU8 138 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 LRP2BPQ9P2M1 347 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 RTL9Q8NET4 1388 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 A0A1W2PQ27 194 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 A0A1W2PQ64 194 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 A0A1W2PQD8 194 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 GOLGA8AA7E2F4 631 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 IFIT3O14879 490 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 MARCKSP29966 332 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 LRMPQ12912 555 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 DRC7Q8IY82 874 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 KCNG4Q8TDN1 519 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 SPTLC3Q9NUV7 552 aa21.74■■□□□ 1.07
TSPAN4-210ENST00000464987 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 GOLGA6L6A8MZA4 724 aa21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 WDHD1O75717 1129 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 TDO2P48775 406 aa21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 DHX40Q8IX18 779 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-210ENST00000464987 AXDND1Q5T1B0 1012 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 TOMM22Q9NS69 142 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 MYH2Q9UKX2 1941 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 COL1A1P02452 1464 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 MROH7-TTC4A0A0A0MT08 1334 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 SDR42E1Q8WUS8 393 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 SDF4Q9BRK5 362 aa21.72■■□□□ 1.07
TSPAN4-210ENST00000464987 ABCF2Q9UG63 623 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms