RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
RPP40-203ENST00000464646 ECM2O94769 699 aaPredicted RBP17.12■□□□□ 0.33
RPP40-203ENST00000464646 TFCP2Q12800 502 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
RPP40-203ENST00000464646 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
RPP40-203ENST00000464646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
RPP40-203ENST00000464646 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
RPP40-203ENST00000464646 CFHR5Q9BXR6 569 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 ZNF341Q9BYN7 854 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 ZFYVE28Q9HCC9 887 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 DAGLAQ9Y4D2 1042 aa17.12■□□□□ 0.33
RPP40-203ENST00000464646 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPP40-203ENST00000464646 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
RPP40-203ENST00000464646 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
RPP40-203ENST00000464646 CDC42EP5Q6NZY7 148 aa17.11■□□□□ 0.33
RPP40-203ENST00000464646 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
RPP40-203ENST00000464646 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
RPP40-203ENST00000464646 PTPN18Q99952 460 aa17.11■□□□□ 0.33
RPP40-203ENST00000464646 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 GNAI2P04899 355 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 TRIM27P14373 513 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 SP3Q02447 781 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
RPP40-203ENST00000464646 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 FAM151AQ8WW52 585 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 BRI3BPQ8WY22 251 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 EFCC1Q9HA90 598 aa17.1■□□□□ 0.33
RPP40-203ENST00000464646 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 SEMA3EO15041 775 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 ERO1BQ86YB8 467 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 XAGE2Q96GT9 111 aa17.09■□□□□ 0.33
RPP40-203ENST00000464646 SPDYE5A6NIY4 337 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 CETPP11597 493 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 NFIAQ12857 509 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 SNAPC2Q13487 334 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 PICALMQ13492 652 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
RPP40-203ENST00000464646 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
RPP40-203ENST00000464646 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
RPP40-203ENST00000464646 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.32
RPP40-203ENST00000464646 MIER1Q8N108 512 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 SNCAIPQ9Y6H5 919 aa17.08■□□□□ 0.32
RPP40-203ENST00000464646 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
RPP40-203ENST00000464646 INPP5BP32019 993 aa17.07■□□□□ 0.32
RPP40-203ENST00000464646 RASGRF1Q13972 1273 aa17.07■□□□□ 0.32
RPP40-203ENST00000464646 KIF22Q14807 665 aa17.07■□□□□ 0.32
RPP40-203ENST00000464646 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
RPP40-203ENST00000464646 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
RPP40-203ENST00000464646 SALL1Q9NSC2 1324 aa17.06■□□□□ 0.32
RPP40-203ENST00000464646 IRF6O14896 467 aa17.06■□□□□ 0.32
RPP40-203ENST00000464646 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
RPP40-203ENST00000464646 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
RPP40-203ENST00000464646 BTDP43251 543 aa17.05■□□□□ 0.32
RPP40-203ENST00000464646 RGS3P49796 1198 aa17.05■□□□□ 0.32
RPP40-203ENST00000464646 PPIL2Q13356 520 aa17.05■□□□□ 0.32
RPP40-203ENST00000464646 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
RPP40-203ENST00000464646 PTPN22Q9Y2R2 807 aa17.05■□□□□ 0.32
RPP40-203ENST00000464646 RPAP1Q9BWH6 1393 aaPredicted RBP17.04■□□□□ 0.32
RPP40-203ENST00000464646 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 MYCP01106 439 aaPredicted RBP17.04■□□□□ 0.32
RPP40-203ENST00000464646 PPATQ06203 517 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 ZFPM1Q8IX07 1006 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 C1orf115Q9H7X2 142 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 LAMB1P07942 1786 aa17.04■□□□□ 0.32
RPP40-203ENST00000464646 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
RPP40-203ENST00000464646 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
RPP40-203ENST00000464646 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
RPP40-203ENST00000464646 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
RPP40-203ENST00000464646 LDHCP07864 332 aa17.02■□□□□ 0.32
RPP40-203ENST00000464646 MECOMQ03112 1051 aa17.02■□□□□ 0.32
RPP40-203ENST00000464646 MTX1Q13505 466 aa17.02■□□□□ 0.32
RPP40-203ENST00000464646 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
RPP40-203ENST00000464646 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 ENTPD3O75355 529 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
RPP40-203ENST00000464646 GSTO1P78417 241 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 SPATA5Q8NB90 893 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 HMG20BQ9P0W2 317 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
RPP40-203ENST00000464646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
RPP40-203ENST00000464646 DOCK2Q92608 1830 aa17■□□□□ 0.31
RPP40-203ENST00000464646 PDHXO00330 501 aa17■□□□□ 0.31
RPP40-203ENST00000464646 TLR2O60603 784 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms