RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
CD46-211ENST00000464082 SPHKAPQ2M3C7 1700 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 IQSEC2Q5JU85 1478 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 FOXO3O43524 673 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 PREPP48147 710 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.2□□□□□ -1.1
CD46-211ENST00000464082 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 TMEM131LA2VDJ0 1609 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 ALKQ9UM73 1620 aa8.2□□□□□ -1.1
CD46-211ENST00000464082 RPRD2Q5VT52 1461 aaKnown RBP8.19□□□□□ -1.1
CD46-211ENST00000464082 ADGRB3O60242 1522 aa8.19□□□□□ -1.1
CD46-211ENST00000464082 COX20Q5RI15 118 aa8.19□□□□□ -1.1
CD46-211ENST00000464082 KLHDC7BQ96G42 594 aa8.19□□□□□ -1.1
CD46-211ENST00000464082 RASSF4Q9H2L5 321 aa8.19□□□□□ -1.1
CD46-211ENST00000464082 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
CD46-211ENST00000464082 ZNF335Q9H4Z2 1342 aaPredicted RBP8.19□□□□□ -1.1
CD46-211ENST00000464082 USP17L15C9J2P7 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L13C9JLJ4 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L12C9JPN9 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L11C9JVI0 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L21D6R901 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L18D6R9N7 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 SART1O43290 800 aaKnown RBP8.18□□□□□ -1.1
CD46-211ENST00000464082 EPHA1P21709 976 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 NFXL1Q6ZNB6 911 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 KLHL23Q8NBE8 558 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 ARXQ96QS3 562 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 PIM2Q9P1W9 311 aa8.18□□□□□ -1.1
CD46-211ENST00000464082 CBLL1Q75N03 491 aa8.17□□□□□ -1.1
CD46-211ENST00000464082 KANK1Q14678 1352 aa8.17□□□□□ -1.1
CD46-211ENST00000464082 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
CD46-211ENST00000464082 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
CD46-211ENST00000464082 CHD2O14647 1828 aaKnown RBP8.17□□□□□ -1.1
CD46-211ENST00000464082 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
CD46-211ENST00000464082 LTKP29376 864 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 HYAL2Q12891 473 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 NAIPQ13075 1403 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 COL19A1Q14993 1142 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 FAM26DQ5JW98 314 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 THEMISQ8N1K5 641 aaPredicted RBP8.16□□□□□ -1.1
CD46-211ENST00000464082 POU5F2Q8N7G0 328 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 GLMNQ92990 594 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 CCDC39Q9UFE4 941 aa8.16□□□□□ -1.1
CD46-211ENST00000464082 ANGEL1Q9UNK9 670 aaKnown RBP8.16□□□□□ -1.1
CD46-211ENST00000464082 CPS1P31327 1500 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 IDI1Q13907 227 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 MSMPQ1L6U9 139 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 SHISA5Q8N114 240 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 FBXL6Q8N531 539 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 SPACA7Q96KW9 195 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
CD46-211ENST00000464082 ZFYVE9O95405 1425 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 TMEM2Q9UHN6 1383 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 KIF1BO60333 1816 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 CLTCL1P53675 1640 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 NWD1Q149M9 1564 aa8.14□□□□□ -1.11
CD46-211ENST00000464082 F13BP05160 661 aa8.13□□□□□ -1.11
CD46-211ENST00000464082 ITGAEP38570 1179 aa8.13□□□□□ -1.11
CD46-211ENST00000464082 POP1Q99575 1024 aaKnown RBP8.13□□□□□ -1.11
CD46-211ENST00000464082 SAP130Q9H0E3 1048 aa8.13□□□□□ -1.11
CD46-211ENST00000464082 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
CD46-211ENST00000464082 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
CD46-211ENST00000464082 HFM1A2PYH4 1435 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
CD46-211ENST00000464082 FOSL1P15407 271 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 MAP4P27816 1152 aaKnown RBP8.12□□□□□ -1.11
CD46-211ENST00000464082 SCNN1AP37088 669 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 NLRP12P59046 1061 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 FKBP5Q13451 457 aaPredicted RBP8.12□□□□□ -1.11
CD46-211ENST00000464082 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 ASIC4Q96FT7 647 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 HIF3AQ9Y2N7 669 aa8.12□□□□□ -1.11
CD46-211ENST00000464082 SETD1AO15047 1707 aaKnown RBP8.12□□□□□ -1.11
CD46-211ENST00000464082 NUP155O75694 1391 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 ITGB5P18084 799 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 RNF208Q9H0X6 261 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.11□□□□□ -1.11
CD46-211ENST00000464082 TRPM2O94759 1503 aa8.11□□□□□ -1.11
CD46-211ENST00000464082 A6NJR5 290 aa8.1□□□□□ -1.11
CD46-211ENST00000464082 KIF4AO95239 1232 aa8.1□□□□□ -1.11
CD46-211ENST00000464082 PRNPP04156 253 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms