RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MFSD4BQ5TF39 518 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 JAKMIP3Q5VZ66 844 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 TMCO3Q6UWJ1 677 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 CLEC17AQ6ZS10 378 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 CCDC146Q8IYE0 955 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 C16orf71Q8IYS4 520 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 ZGPATQ8N5A5 531 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 TBC1D22AQ8WUA7 517 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 N4BP2L2Q92802 583 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 RRP7BPQ9NSQ0 103 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 ETAA1Q9NY74 926 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 ADAMTS8Q9UP79 889 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 TNNQ9UQP3 1299 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 CTAGE5O15320 804 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 NDUFV2P19404 249 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ACTN2P35609 894 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 KCNC4Q03721 635 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ARHGAP29Q52LW3 1261 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 PLEKHO1Q53GL0 409 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 CPLX2Q6PUV4 134 aaKnown RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC186Q7Z3E2 898 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 RETREG3Q86VR2 466 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 MIEF2Q96C03 454 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ERO1AQ96HE7 468 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 FAXDC2Q96IV6 333 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 PRDM6Q9NQX0 595 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 TRMT1Q9NXH9 659 aaKnown RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 CHIC2Q9UKJ5 165 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD30AQ9BXX3 1397 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 LTBP3Q9NS15 1303 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 AFDNP55196 1824 aaKnown RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 SKAP2O75563 359 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 DXOO77932 396 aaKnown RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 IVLP07476 585 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 PEX19P40855 299 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 NAP1L1P55209 391 aaKnown RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ATP2B2Q01814 1243 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC96Q2M329 555 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 C1QTNF12Q5T7M4 302 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD45Q5TZF3 282 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 FAM160A2Q8N612 972 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 SYTL4Q96C24 671 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-205ENST00000463753 ZBTB3Q9H5J0 574 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 PLEKHH1Q9ULM0 1364 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 RAD50Q92878 1312 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 FER1L6Q2WGJ9 1857 aa4.21□□□□□ -1.74
COL8A1-205ENST00000463753 USP47Q96K76 1375 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 MAFGO15525 162 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 AP5Z1O43299 807 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 SMARCA5O60264 1052 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 GADD45BO75293 160 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 SLU7O95391 586 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 LIG3P49916 1009 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CCNHP51946 323 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 IRX1P78414 480 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 SMC1AQ14683 1233 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 UVSSAQ2YD98 709 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 FBXW10Q5XX13 1052 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 NFXL1Q6ZNB6 911 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TRIM74Q86UV6 250 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TRIM73Q86UV7 250 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ZNF428Q96B54 188 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 NRBP1Q9UHY1 535 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 COL5A3P25940 1745 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 A0A0G2JS52 829 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 EME2A4GXA9 379 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 RNF40O75150 1001 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 NF2P35240 595 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 MTA1Q13330 715 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 SNX1Q13596 522 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 PTPN14Q15678 1187 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ISM2Q6H9L7 571 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 KIRREL3Q8IZU9 778 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TMTC2Q8N394 836 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TCP11L2Q8N4U5 519 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 LRRN4CLQ8ND94 238 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 FAM210AQ96ND0 272 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CFHR5Q9BXR6 569 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TRIM6Q9C030 488 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ARGLU1Q9NWB6 273 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 POLR3AO14802 1390 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 USP27XA6NNY8 438 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TPD52L2O43399 206 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 KINO60870 393 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ADAMTS2O95450 1211 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 JUNDP17535 347 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CASTP20810 708 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ELF1P32519 619 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 GCKP35557 465 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CORO7P57737 925 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TBC1D8BQ0IIM8 1120 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 MTMR2Q13614 643 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 NOL8Q76FK4 1167 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 TADA2BQ86TJ2 420 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CTCFLQ8NI51 663 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 MRFAP1L1Q96HT8 127 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 PCMTD1Q96MG8 357 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ZSCAN16Q9H4T2 348 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 SUDS3Q9H7L9 328 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms