RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
COMMD3-205ENST00000463688 NBPF12Q5TAG4 269 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-205ENST00000463688 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
COMMD3-205ENST00000463688 RNF186Q9NXI6 227 aa16.49■□□□□ 0.23
COMMD3-205ENST00000463688 TRPA1O75762 1119 aa16.48■□□□□ 0.23
COMMD3-205ENST00000463688 PLCG2P16885 1265 aa16.48■□□□□ 0.23
COMMD3-205ENST00000463688 ARID4AP29374 1257 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-205ENST00000463688 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
COMMD3-205ENST00000463688 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
COMMD3-205ENST00000463688 PKN2Q16513 984 aaKnown RBP16.48■□□□□ 0.23
COMMD3-205ENST00000463688 POLR2AP24928 1970 aaKnown RBP16.48■□□□□ 0.23
COMMD3-205ENST00000463688 ENTPD3O75355 529 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-205ENST00000463688 BAG3O95817 575 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 ZNF341Q9BYN7 854 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
COMMD3-205ENST00000463688 DAGLAQ9Y4D2 1042 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
COMMD3-205ENST00000463688 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 PRDX5P30044 214 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 ADORA1P30542 326 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 MOB2Q70IA6 237 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
COMMD3-205ENST00000463688 RLBP1P12271 317 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 GTF2A2P52657 109 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
COMMD3-205ENST00000463688 WNK4Q96J92 1243 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 CDC42EP5Q6NZY7 148 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 ERO1BQ86YB8 467 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
COMMD3-205ENST00000463688 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
COMMD3-205ENST00000463688 GAKO14976 1311 aa16.44■□□□□ 0.22
COMMD3-205ENST00000463688 GRIK5Q16478 980 aa16.44■□□□□ 0.22
COMMD3-205ENST00000463688 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
COMMD3-205ENST00000463688 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
COMMD3-205ENST00000463688 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
COMMD3-205ENST00000463688 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 GPR75-ASB3A0A0A6YYF3 556 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-205ENST00000463688 DIXDC1Q155Q3 683 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
COMMD3-205ENST00000463688 WRNIP1Q96S55 665 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 ZIC5Q96T25 663 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 ZBTB40Q9NUA8 1239 aa16.43■□□□□ 0.22
COMMD3-205ENST00000463688 CETPP11597 493 aa16.42■□□□□ 0.22
COMMD3-205ENST00000463688 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
COMMD3-205ENST00000463688 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
COMMD3-205ENST00000463688 OPTNQ96CV9 577 aa16.42■□□□□ 0.22
COMMD3-205ENST00000463688 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
COMMD3-205ENST00000463688 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-205ENST00000463688 SPDYE5A6NIY4 337 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 BTDP43251 543 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 MECOMQ03112 1051 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 PPATQ06203 517 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-205ENST00000463688 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
COMMD3-205ENST00000463688 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
COMMD3-205ENST00000463688 ZNF646O15015 1829 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-205ENST00000463688 FKTNO75072 461 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
COMMD3-205ENST00000463688 CACNB3P54284 484 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 DGKZQ13574 1117 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 VGLL4Q14135 290 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
COMMD3-205ENST00000463688 ABHD8Q96I13 439 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
COMMD3-205ENST00000463688 ELP3Q9H9T3 547 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 TSKSQ9UJT2 592 aa16.4■□□□□ 0.22
COMMD3-205ENST00000463688 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.22
COMMD3-205ENST00000463688 GPR25O00155 361 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 RGS3P49796 1198 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 TCP10Q12799 353 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
COMMD3-205ENST00000463688 PPIL2Q13356 520 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.39■□□□□ 0.21
COMMD3-205ENST00000463688 AACSQ86V21 672 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
COMMD3-205ENST00000463688 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 TBC1D12O60347 775 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 MCAMP43121 646 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 NOL9Q5SY16 702 aaKnown RBP16.38■□□□□ 0.21
COMMD3-205ENST00000463688 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD3-205ENST00000463688 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms