RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
SMC1A-204ENST00000463684 SHISA4Q96DD7 197 aa18.24■□□□□ 0.51
SMC1A-204ENST00000463684 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
SMC1A-204ENST00000463684 SUGT1Q9Y2Z0 365 aa18.24■□□□□ 0.51
SMC1A-204ENST00000463684 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
SMC1A-204ENST00000463684 GJB1P08034 283 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 CCL5P13501 91 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 UBXN2AP68543 259 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 HHIPL2Q6UWX4 724 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
SMC1A-204ENST00000463684 MYPNQ86TC9 1320 aa18.23■□□□□ 0.51
SMC1A-204ENST00000463684 CTGFP29279 349 aa18.22■□□□□ 0.51
SMC1A-204ENST00000463684 INPP5BP32019 993 aa18.22■□□□□ 0.51
SMC1A-204ENST00000463684 ARAP2Q8WZ64 1704 aa18.22■□□□□ 0.51
SMC1A-204ENST00000463684 PDE8BO95263 885 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 BCAMP50895 628 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 LRRC24Q50LG9 513 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 FAM151AQ8WW52 585 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 KCNH4Q9UQ05 1017 aa18.21■□□□□ 0.51
SMC1A-204ENST00000463684 RPAP1Q9BWH6 1393 aaPredicted RBP18.2■□□□□ 0.5
SMC1A-204ENST00000463684 FCGRTP55899 365 aa18.2■□□□□ 0.5
SMC1A-204ENST00000463684 UBE2Q1Q7Z7E8 422 aa18.2■□□□□ 0.5
SMC1A-204ENST00000463684 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
SMC1A-204ENST00000463684 PARK7Q99497 189 aaKnown RBP18.2■□□□□ 0.5
SMC1A-204ENST00000463684 IFIT1P09914 478 aaKnown RBP18.19■□□□□ 0.5
SMC1A-204ENST00000463684 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
SMC1A-204ENST00000463684 SLAIN1Q8ND83 568 aa18.19■□□□□ 0.5
SMC1A-204ENST00000463684 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
SMC1A-204ENST00000463684 ZNF112Q9UJU3 913 aa18.19■□□□□ 0.5
SMC1A-204ENST00000463684 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
SMC1A-204ENST00000463684 PRKCZQ05513 592 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 TCP10Q12799 353 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 SLC17A8Q8NDX2 589 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 WDR66Q8TBY9 1149 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
SMC1A-204ENST00000463684 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 ZSWIM8A7E2V4 1837 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 ADGRA2Q96PE1 1338 aa18.18■□□□□ 0.5
SMC1A-204ENST00000463684 SZT2Q5T011 3432 aa18.17■□□□□ 0.5
SMC1A-204ENST00000463684 CXCL11O14625 94 aa18.17■□□□□ 0.5
SMC1A-204ENST00000463684 FARP2O94887 1054 aaPredicted RBP18.17■□□□□ 0.5
SMC1A-204ENST00000463684 PUM3Q15397 648 aaKnown RBP18.17■□□□□ 0.5
SMC1A-204ENST00000463684 RABL6Q3YEC7 729 aaPredicted RBP18.17■□□□□ 0.5
SMC1A-204ENST00000463684 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
SMC1A-204ENST00000463684 UTYO14607 1347 aa18.17■□□□□ 0.5
SMC1A-204ENST00000463684 DLL1O00548 723 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 ZBTB7BO15156 539 aaPredicted RBP18.16■□□□□ 0.5
SMC1A-204ENST00000463684 EVI5O60447 810 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 SGPL1O95470 568 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 CAPN2P17655 700 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 MOGSQ13724 837 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 NOL9Q5SY16 702 aaKnown RBP18.16■□□□□ 0.5
SMC1A-204ENST00000463684 PRO3102Q9H379 93 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
SMC1A-204ENST00000463684 TRIOBPQ9H2D6 2365 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 ADCY3O60266 1144 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 TFRCP02786 760 aaKnown RBP18.15■□□□□ 0.5
SMC1A-204ENST00000463684 CYP2C8P10632 490 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 BCRP11274 1271 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 CDC42EP5Q6NZY7 148 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 FASTKD5Q7L8L6 764 aaKnown RBP18.15■□□□□ 0.5
SMC1A-204ENST00000463684 UNC93B1Q9H1C4 597 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 GABRQQ9UN88 632 aa18.15■□□□□ 0.5
SMC1A-204ENST00000463684 A0A1W2PPC1 479 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 SLC5A1P13866 664 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 GPAT2Q6NUI2 795 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 ANKRD44Q8N8A2 993 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
SMC1A-204ENST00000463684 FGFR2P21802 821 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 NFIAQ12857 509 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 LPIN2Q92539 896 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
SMC1A-204ENST00000463684 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 ZHX2Q9Y6X8 837 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 CEP290O15078 2479 aa18.13■□□□□ 0.49
SMC1A-204ENST00000463684 FLT3LGP49771 235 aa18.12■□□□□ 0.49
SMC1A-204ENST00000463684 DIXDC1Q155Q3 683 aa18.12■□□□□ 0.49
SMC1A-204ENST00000463684 PXYLP1Q8TE99 480 aa18.12■□□□□ 0.49
SMC1A-204ENST00000463684 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
SMC1A-204ENST00000463684 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
SMC1A-204ENST00000463684 RANBP2P49792 3224 aaKnown RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 A0A0G2JLL6 359 aaPredicted RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 TNPO2O14787 897 aaKnown RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 LDHBP07195 334 aaKnown RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 GADL1Q6ZQY3 521 aa18.11■□□□□ 0.49
SMC1A-204ENST00000463684 PRRT2Q7Z6L0 340 aaPredicted RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 SCYL3Q8IZE3 742 aa18.11■□□□□ 0.49
SMC1A-204ENST00000463684 DEFB118Q96PH6 123 aa18.11■□□□□ 0.49
SMC1A-204ENST00000463684 GNL3LQ9NVN8 582 aaKnown RBP18.11■□□□□ 0.49
SMC1A-204ENST00000463684 INHAP05111 366 aa18.1■□□□□ 0.49
SMC1A-204ENST00000463684 ELNP15502 786 aa18.1■□□□□ 0.49
SMC1A-204ENST00000463684 PTPRAP18433 802 aa18.1■□□□□ 0.49
SMC1A-204ENST00000463684 IRF5Q13568 498 aa18.1■□□□□ 0.49
SMC1A-204ENST00000463684 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
SMC1A-204ENST00000463684 STAP2Q9UGK3 403 aa18.1■□□□□ 0.49
SMC1A-204ENST00000463684 SLC45A1Q9Y2W3 748 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms