RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 A0A1B0GUL6 1792 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ATP2B3Q16720 1220 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 MYOZ2Q9NPC6 264 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 GPR108Q9NPR9 543 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 PSME4Q14997 1843 aa11.77□□□□□ -0.52
PTPRD-207ENST00000463477 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.53
PTPRD-207ENST00000463477 AK2P54819 239 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 TIMM10P62072 90 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 PTH1RQ03431 593 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 TFCP2Q12800 502 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 TNNI3KQ59H18 835 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 CDC37L1Q7L3B6 337 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 POTEDQ86YR6 584 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 FPGT-TNNI3KV9GXZ4 949 aa11.77□□□□□ -0.53
PTPRD-207ENST00000463477 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
PTPRD-207ENST00000463477 PANK2Q9BZ23 570 aa11.76□□□□□ -0.53
PTPRD-207ENST00000463477 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
PTPRD-207ENST00000463477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
PTPRD-207ENST00000463477 A0A1B0GUL7 405 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 PSMA5P28066 241 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 SCARF1Q14162 830 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 DNAJC5GQ8N7S2 189 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 LAMA4Q16363 1823 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 WNT10BO00744 389 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 PRPF40AO75400 957 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 CREB3L3Q68CJ9 461 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 GPT2Q8TD30 523 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 ZBED3Q96IU2 234 aaPredicted RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 IQSEC3Q9UPP2 1182 aaPredicted RBP11.75□□□□□ -0.53
PTPRD-207ENST00000463477 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
PTPRD-207ENST00000463477 MYH7P12883 1935 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 SEMA3EO15041 775 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 NBPF9Q3BBW0 867 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
PTPRD-207ENST00000463477 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
PTPRD-207ENST00000463477 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 GLIS2Q9BZE0 524 aaPredicted RBP11.74□□□□□ -0.53
PTPRD-207ENST00000463477 BOLA2Q9H3K6 86 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
PTPRD-207ENST00000463477 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 SLC27A2O14975 620 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 ADORA1P30542 326 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 PHKA1P46020 1223 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 HTRA3P83110 453 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 CST9Q5W186 159 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 NEUROD6Q96NK8 337 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 HAUS7Q99871 368 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
PTPRD-207ENST00000463477 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
PTPRD-207ENST00000463477 A0A0D9SFI3 127 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 TRAF5O00463 557 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
PTPRD-207ENST00000463477 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
PTPRD-207ENST00000463477 FMR1Q06787 632 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPRD-207ENST00000463477 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
PTPRD-207ENST00000463477 KRT32Q14532 448 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 DLGAP5Q15398 846 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 ADCK5Q3MIX3 580 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
PTPRD-207ENST00000463477 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
PTPRD-207ENST00000463477 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms