RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 TIMM10P62072 90 aa27.42■■□□□ 1.98
PDLIM7-206ENST00000463411 DCAF15Q66K64 600 aa27.42■■□□□ 1.98
PDLIM7-206ENST00000463411 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.42■■□□□ 1.98
PDLIM7-206ENST00000463411 PDS5AQ29RF7 1337 aaKnown RBP27.41■■□□□ 1.98
PDLIM7-206ENST00000463411 IGF2BP3O00425 579 aaKnown RBP eCLIP27.41■■□□□ 1.98
PDLIM7-206ENST00000463411 XAGE2Q96GT9 111 aa27.41■■□□□ 1.98
PDLIM7-206ENST00000463411 MYH2Q9UKX2 1941 aa27.41■■□□□ 1.98
PDLIM7-206ENST00000463411 AK9Q5TCS8 1911 aa27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 G3BP1Q13283 466 aaKnown RBP eCLIP27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 RASGRF1Q13972 1273 aa27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 YTHDC1Q96MU7 727 aaKnown RBP27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 NEUROD6Q96NK8 337 aa27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 WRNIP1Q96S55 665 aa27.4■■□□□ 1.98
PDLIM7-206ENST00000463411 PNMA6EA0A0J9YXQ4 647 aa27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 GORABQ5T7V8 394 aa27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 CDC42EP5Q6NZY7 148 aa27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 DZIP1Q86YF9 867 aaKnown RBP27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 SLF2Q8IX21 1173 aa27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 FAM151AQ8WW52 585 aa27.39■■□□□ 1.98
PDLIM7-206ENST00000463411 SPTY2D1Q68D10 685 aaPredicted RBP27.38■■□□□ 1.97
PDLIM7-206ENST00000463411 OTUD5Q96G74 571 aa27.38■■□□□ 1.97
PDLIM7-206ENST00000463411 R3HDMLQ9H3Y0 253 aa27.38■■□□□ 1.97
PDLIM7-206ENST00000463411 ABCF2Q9UG63 623 aa27.38■■□□□ 1.97
PDLIM7-206ENST00000463411 TESPA1A2RU30 521 aaPredicted RBP27.37■■□□□ 1.97
PDLIM7-206ENST00000463411 GTF2A2P52657 109 aa27.37■■□□□ 1.97
PDLIM7-206ENST00000463411 ZNF341Q9BYN7 854 aa27.37■■□□□ 1.97
PDLIM7-206ENST00000463411 USP40Q9NVE5 1235 aa27.37■■□□□ 1.97
PDLIM7-206ENST00000463411 RGS19P49795 217 aa27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 MLLT1Q03111 559 aaPredicted RBP27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 TCP10Q12799 353 aa27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 ITPRIPQ8IWB1 547 aa27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 CNKSR2Q8WXI2 1034 aa27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 DOCK2Q92608 1830 aa27.36■■□□□ 1.97
PDLIM7-206ENST00000463411 SPDYE5A6NIY4 337 aa27.35■■□□□ 1.97
PDLIM7-206ENST00000463411 SNCAIPQ9Y6H5 919 aa27.35■■□□□ 1.97
PDLIM7-206ENST00000463411 CCL15-CCL14A0A0B4J2E2 113 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 CRHR2Q13324 411 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 OS9Q13438 667 aaPredicted RBP27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 CCL15Q16663 113 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 ERO1BQ86YB8 467 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 MS4A4AQ96JQ5 239 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 GAKO14976 1311 aa27.34■■□□□ 1.97
PDLIM7-206ENST00000463411 NFIAQ12857 509 aa27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 FBXO46Q6PJ61 603 aaPredicted RBP27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 ERICH6Q7L0X2 663 aa27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 MIGA2Q7L4E1 593 aa27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 ZKSCAN4Q969J2 545 aaPredicted RBP27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 PTPN18Q99952 460 aa27.33■■□□□ 1.97
PDLIM7-206ENST00000463411 ERO1AQ96HE7 468 aa27.32■■□□□ 1.96
PDLIM7-206ENST00000463411 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 POLA2Q14181 598 aa27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 SPATA5Q8NB90 893 aa27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 BRI3BPQ8WY22 251 aa27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 FAM198AQ9UFP1 575 aa27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.31■■□□□ 1.96
PDLIM7-206ENST00000463411 UQCRFS1P1P0C7P4 283 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 CETPP11597 493 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 ARID4AP29374 1257 aaPredicted RBP27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 ATP8B2P98198 1209 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 PPIL2Q13356 520 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 SSH3Q8TE77 659 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 C1orf115Q9H7X2 142 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 HMG20BQ9P0W2 317 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 MROH7-TTC4A0A0A0MT08 1334 aa27.3■■□□□ 1.96
PDLIM7-206ENST00000463411 ENTPD3O75355 529 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 SOX10P56693 466 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 GSTO1P78417 241 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 SNAPC2Q13487 334 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 TAF1CQ15572 869 aaPredicted RBP27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 IDI2Q9BXS1 227 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 ZFYVE28Q9HCC9 887 aa27.29■■□□□ 1.96
PDLIM7-206ENST00000463411 BTDP43251 543 aa27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 RGS3P49796 1198 aa27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 MECOMQ03112 1051 aa27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 FAM163AQ96GL9 167 aaPredicted RBP27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 GPR108Q9NPR9 543 aa27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 TRIM17Q9Y577 477 aa27.28■■□□□ 1.96
PDLIM7-206ENST00000463411 RFX7Q2KHR2 1363 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 SURF6O75683 361 aaKnown RBP27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 RLBP1P12271 317 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 INPP5BP32019 993 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 PPATQ06203 517 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 ZSCAN29Q8IWY8 852 aaPredicted RBP27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 ZNF112Q9UJU3 913 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 MAST2Q6P0Q8 1798 aa27.27■■□□□ 1.96
PDLIM7-206ENST00000463411 IRF6O14896 467 aa27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 LDHCP07864 332 aa27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 SP3Q02447 781 aa27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 TNNI3KQ59H18 835 aa27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 ZCCHC17Q9NP64 241 aaKnown RBP27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 FPGT-TNNI3KV9GXZ4 949 aa27.26■■□□□ 1.95
PDLIM7-206ENST00000463411 ZBTB7BO15156 539 aaPredicted RBP27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 CCDC158Q5M9N0 1113 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 TTC39AQ5SRH9 613 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 PI16Q6UXB8 463 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 OTOP1Q7RTM1 612 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 FAM43AQ8N2R8 423 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 CD99L2Q8TCZ2 262 aa27.25■■□□□ 1.95
PDLIM7-206ENST00000463411 RAI14Q9P0K7 980 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms