RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 CSADQ9Y600 493 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 AOX1Q06278 1338 aa16.1■□□□□ 0.17
HDAC1-203ENST00000463172 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 SSC5DA1L4H1 1573 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 USP2O75604 605 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-203ENST00000463172 ALDH1A1P00352 501 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 LDHCP07864 332 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 OTUD7BQ6GQQ9 843 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 USP40Q9NVE5 1235 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-203ENST00000463172 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
HDAC1-203ENST00000463172 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-203ENST00000463172 ARID4AP29374 1257 aaPredicted RBP16.08■□□□□ 0.16
HDAC1-203ENST00000463172 TM4SF4P48230 202 aa16.08■□□□□ 0.16
HDAC1-203ENST00000463172 CACNB3P54284 484 aa16.08■□□□□ 0.16
HDAC1-203ENST00000463172 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.16
HDAC1-203ENST00000463172 DIXDC1Q155Q3 683 aa16.08■□□□□ 0.16
HDAC1-203ENST00000463172 RPAP2Q8IXW5 612 aaPredicted RBP16.08■□□□□ 0.16
HDAC1-203ENST00000463172 FAM151AQ8WW52 585 aa16.08■□□□□ 0.16
HDAC1-203ENST00000463172 TEPSINQ96N21 525 aa16.08■□□□□ 0.16
HDAC1-203ENST00000463172 IGSF3O75054 1194 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 CDC42EP5Q6NZY7 148 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 WNK4Q96J92 1243 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 NOL10Q9BSC4 688 aaKnown RBP16.07■□□□□ 0.16
HDAC1-203ENST00000463172 HMG20BQ9P0W2 317 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 FZD1Q9UP38 647 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 COG6Q9Y2V7 657 aa16.07■□□□□ 0.16
HDAC1-203ENST00000463172 GAKO14976 1311 aa16.06■□□□□ 0.16
HDAC1-203ENST00000463172 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-203ENST00000463172 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-203ENST00000463172 ZNF341Q9BYN7 854 aa16.06■□□□□ 0.16
HDAC1-203ENST00000463172 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
HDAC1-203ENST00000463172 LRP2BPQ9P2M1 347 aa16.06■□□□□ 0.16
HDAC1-203ENST00000463172 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
HDAC1-203ENST00000463172 MROH7-TTC4A0A0A0MT08 1334 aa16.05■□□□□ 0.16
HDAC1-203ENST00000463172 CLMNQ96JQ2 1002 aa16.05■□□□□ 0.16
HDAC1-203ENST00000463172 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
HDAC1-203ENST00000463172 ENTPD3O75355 529 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 WDHD1O75717 1129 aaPredicted RBP16.04■□□□□ 0.16
HDAC1-203ENST00000463172 CAPN15O75808 1086 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 BTDP43251 543 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 MECOMQ03112 1051 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 TCP10Q12799 353 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC1-203ENST00000463172 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 ELP3Q9H9T3 547 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 LAMB1P07942 1786 aa16.04■□□□□ 0.16
HDAC1-203ENST00000463172 MCAMP43121 646 aa16.03■□□□□ 0.16
HDAC1-203ENST00000463172 ZSCAN29Q8IWY8 852 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-203ENST00000463172 OPTNQ96CV9 577 aa16.03■□□□□ 0.16
HDAC1-203ENST00000463172 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
HDAC1-203ENST00000463172 EXOC6BQ9Y2D4 811 aa16.03■□□□□ 0.16
HDAC1-203ENST00000463172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-203ENST00000463172 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 BAG3O95817 575 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 GTF2A2P52657 109 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 DGKZQ13574 1117 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 VGLL4Q14135 290 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 NOM1Q5C9Z4 860 aaKnown RBP16.02■□□□□ 0.16
HDAC1-203ENST00000463172 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-203ENST00000463172 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
HDAC1-203ENST00000463172 NSUN4Q96CB9 384 aaKnown RBP16.02■□□□□ 0.16
HDAC1-203ENST00000463172 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 CFHR5Q9BXR6 569 aa16.02■□□□□ 0.16
HDAC1-203ENST00000463172 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 MAST2Q6P0Q8 1798 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 RAB11FIP3O75154 756 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 PLCG2P16885 1265 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 RGS3P49796 1198 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 NFIAQ12857 509 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-203ENST00000463172 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-203ENST00000463172 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 AACSQ86V21 672 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 ERO1BQ86YB8 467 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 IFNL1Q8IU54 200 aa16.01■□□□□ 0.15
HDAC1-203ENST00000463172 CCDC8Q9H0W5 538 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-203ENST00000463172 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
HDAC1-203ENST00000463172 MIGA2Q7L4E1 593 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 OTUD5Q96G74 571 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 ABHD8Q96I13 439 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 SNRKQ9NRH2 765 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
HDAC1-203ENST00000463172 DBNLQ9UJU6 430 aaKnown RBP16■□□□□ 0.15
HDAC1-203ENST00000463172 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
HDAC1-203ENST00000463172 CETPP11597 493 aa15.99■□□□□ 0.15
HDAC1-203ENST00000463172 PICALMQ13492 652 aa15.99■□□□□ 0.15
HDAC1-203ENST00000463172 CTU1Q7Z7A3 348 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms