RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 DDX56Q9NY93 547 aaKnown RBP8.04□□□□□ -1.12
COPS3-205ENST00000463097 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 POLR3KQ9Y2Y1 108 aaPredicted RBP8.04□□□□□ -1.12
COPS3-205ENST00000463097 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 A0A1W2PQH9 124 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 PARNO95453 639 aaKnown RBP8.03□□□□□ -1.12
COPS3-205ENST00000463097 EIF2AK2P19525 551 aaKnown RBP8.03□□□□□ -1.12
COPS3-205ENST00000463097 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
COPS3-205ENST00000463097 PTPN11Q06124 597 aaPredicted RBP8.03□□□□□ -1.12
COPS3-205ENST00000463097 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 PLEKHG6Q3KR16 790 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 ST13P5Q8NFI4 369 aaPredicted RBP8.03□□□□□ -1.12
COPS3-205ENST00000463097 PDZRN3Q9UPQ7 1066 aa8.03□□□□□ -1.12
COPS3-205ENST00000463097 GRIN3BO60391 1043 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 DIAPH1O60610 1272 aaKnown RBP8.02□□□□□ -1.13
COPS3-205ENST00000463097 PTPRAP18433 802 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 FGFR3P22607 806 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 TCEA2Q15560 299 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
COPS3-205ENST00000463097 C6orf15Q6UXA7 325 aaPredicted RBP8.02□□□□□ -1.13
COPS3-205ENST00000463097 SPATC1Q76KD6 591 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 FAM178BQ8IXR5 827 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
COPS3-205ENST00000463097 STAG1Q8WVM7 1258 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 UBE2OQ9C0C9 1292 aaKnown RBP8.02□□□□□ -1.13
COPS3-205ENST00000463097 ADAM19Q9H013 955 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 IRF2BPLQ9H1B7 796 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 PTCH2Q9Y6C5 1203 aa8.02□□□□□ -1.13
COPS3-205ENST00000463097 B2RBV5 119 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
COPS3-205ENST00000463097 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
COPS3-205ENST00000463097 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 CCDC181Q5TID7 509 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 ADAMTSL4Q6UY14 1074 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 SYNPOQ8N3V7 929 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 ZNF669Q96BR6 464 aaPredicted RBP8.01□□□□□ -1.13
COPS3-205ENST00000463097 TM9SF2Q99805 663 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 ZMYM5Q9UJ78 669 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 PHF24Q9UPV7 400 aa8.01□□□□□ -1.13
COPS3-205ENST00000463097 ARID4BQ4LE39 1312 aaPredicted RBP8.01□□□□□ -1.13
COPS3-205ENST00000463097 SOBPA7XYQ1 873 aa8□□□□□ -1.13
COPS3-205ENST00000463097 HCLS1P14317 486 aaPredicted RBP8□□□□□ -1.13
COPS3-205ENST00000463097 GUCY2CP25092 1073 aa8□□□□□ -1.13
COPS3-205ENST00000463097 CTBSQ01459 385 aa8□□□□□ -1.13
COPS3-205ENST00000463097 MPRIPQ6WCQ1 1025 aa8□□□□□ -1.13
COPS3-205ENST00000463097 PDZRN4Q6ZMN7 1036 aaPredicted RBP8□□□□□ -1.13
COPS3-205ENST00000463097 SYT9Q86SS6 491 aa8□□□□□ -1.13
COPS3-205ENST00000463097 PDZD3Q86UT5 571 aa8□□□□□ -1.13
COPS3-205ENST00000463097 FAM35AQ86V20 835 aa8□□□□□ -1.13
COPS3-205ENST00000463097 CCDC155Q8N6L0 562 aa8□□□□□ -1.13
COPS3-205ENST00000463097 GTPBP3Q969Y2 492 aaKnown RBP8□□□□□ -1.13
COPS3-205ENST00000463097 ZNF837Q96EG3 531 aaPredicted RBP8□□□□□ -1.13
COPS3-205ENST00000463097 ANTXR1Q9H6X2 564 aa8□□□□□ -1.13
COPS3-205ENST00000463097 MEIS3P2A8K0S8 358 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 ASMTLO95671 621 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 VIL1P09327 827 aaKnown RBP7.99□□□□□ -1.13
COPS3-205ENST00000463097 CPB1P15086 417 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
COPS3-205ENST00000463097 ZSCAN1Q8NBB4 408 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 CHPF2Q9P2E5 772 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 PPME1Q9Y570 386 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 PRR36Q9H6K5 1346 aa7.99□□□□□ -1.13
COPS3-205ENST00000463097 FAM177BA6PVY3 158 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 AXIN1O15169 862 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
COPS3-205ENST00000463097 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 IKBKEQ14164 716 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
COPS3-205ENST00000463097 PERM1Q5SV97 790 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 MRM1Q6IN84 353 aaKnown RBP7.98□□□□□ -1.13
COPS3-205ENST00000463097 TMEM40Q8WWA1 233 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 LACRTQ9GZZ8 138 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
COPS3-205ENST00000463097 TYW1Q9NV66 732 aaKnown RBP7.98□□□□□ -1.13
COPS3-205ENST00000463097 CACNA2D2Q9NY47 1150 aa7.98□□□□□ -1.13
COPS3-205ENST00000463097 GFRA2O00451 464 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 SIN3BO75182 1162 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 HTR3BO95264 441 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 S100BP04271 92 aaPredicted RBP7.97□□□□□ -1.13
COPS3-205ENST00000463097 PDGFRBP09619 1106 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 CDK8P49336 464 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 MMRN1Q13201 1228 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 ZNF468Q5VIY5 522 aaPredicted RBP7.97□□□□□ -1.13
COPS3-205ENST00000463097 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 EEPD1Q7L9B9 569 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 KRT26Q7Z3Y9 468 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 TAB3Q8N5C8 712 aaPredicted RBP7.97□□□□□ -1.13
COPS3-205ENST00000463097 ZSWIM2Q8NEG5 633 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 TRERF1Q96PN7 1200 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 SMG9Q9H0W8 520 aaKnown RBP7.97□□□□□ -1.13
COPS3-205ENST00000463097 SLC6A14Q9UN76 642 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 TRIM33Q9UPN9 1127 aa7.97□□□□□ -1.13
COPS3-205ENST00000463097 PLAAQ9Y263 795 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms