RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PHIPQ8WWQ0 1821 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 SOX1O00570 391 aaPredicted RBP9.92□□□□□ -0.82
SMC3-202ENST00000462899 PRMT2P55345 433 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 ARHGEF6Q15052 776 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 UBE3BQ7Z3V4 1068 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 ZNF70Q9UC06 446 aaPredicted RBP9.92□□□□□ -0.82
SMC3-202ENST00000462899 SNCAIPQ9Y6H5 919 aa9.92□□□□□ -0.82
SMC3-202ENST00000462899 A0A1W2PPC1 479 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 F8W031 263 aaPredicted RBP9.91□□□□□ -0.82
SMC3-202ENST00000462899 ELL2O00472 640 aaPredicted RBP9.91□□□□□ -0.82
SMC3-202ENST00000462899 GJA8P48165 433 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 TNFAIP1Q13829 316 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 GCKRQ14397 625 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 C17orf99Q6UX52 265 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 TSPYL6Q8N831 410 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 SLC17A8Q8NDX2 589 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
SMC3-202ENST00000462899 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
SMC3-202ENST00000462899 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
SMC3-202ENST00000462899 MYBBP1AQ9BQG0 1328 aaKnown RBP9.9□□□□□ -0.82
SMC3-202ENST00000462899 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.82
SMC3-202ENST00000462899 TAF5LO75529 589 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
SMC3-202ENST00000462899 GNAI1P63096 354 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 MAP3K9P80192 1104 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 CCDC30Q5VVM6 783 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 MPHOSPH8Q99549 860 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 TMEM39BQ9GZU3 492 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 SRRDQ9UH36 339 aa9.9□□□□□ -0.82
SMC3-202ENST00000462899 RPAP1Q9BWH6 1393 aaPredicted RBP9.89□□□□□ -0.83
SMC3-202ENST00000462899 DOCK2Q92608 1830 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 IRF6O14896 467 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 GJB1P08034 283 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 G2E3Q7L622 706 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 ZNF804AQ7Z570 1209 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 SLAIN1Q8ND83 568 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 TDRD3Q9H7E2 651 aaKnown RBP9.89□□□□□ -0.83
SMC3-202ENST00000462899 JAG2Q9Y219 1238 aa9.89□□□□□ -0.83
SMC3-202ENST00000462899 CETPP11597 493 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 OSBPP22059 807 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 KCNJ4P48050 445 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 FOXO4P98177 505 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 NEXNQ0ZGT2 675 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 PPIL2Q13356 520 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 MOGSQ13724 837 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 ERO1BQ86YB8 467 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 DZIP1LQ8IYY4 767 aaKnown RBP9.88□□□□□ -0.83
SMC3-202ENST00000462899 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
SMC3-202ENST00000462899 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
SMC3-202ENST00000462899 DPF3Q92784 378 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 LRCH3Q96II8 777 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 AK9Q5TCS8 1911 aa9.88□□□□□ -0.83
SMC3-202ENST00000462899 DDX60LQ5H9U9 1706 aaKnown RBP9.87□□□□□ -0.83
SMC3-202ENST00000462899 PLXNB2O15031 1838 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 CCL5P13501 91 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 GRK4P32298 578 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 KIF22Q14807 665 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 GRIK5Q16478 980 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 MFSD14BQ5SR56 506 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 HTATIP2Q9BUP3 242 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
SMC3-202ENST00000462899 RIPOR2Q9Y4F9 1068 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 CSADQ9Y600 493 aa9.87□□□□□ -0.83
SMC3-202ENST00000462899 ANKRD18BA2A2Z9 1011 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 TCP10L2B9ZVM9 353 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 BCRP11274 1271 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 PSMC4P43686 418 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 CRKP46108 304 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 RBM5P52756 815 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMC3-202ENST00000462899 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 DOCK1Q14185 1865 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 ANKRD23Q86SG2 305 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 ZKSCAN4Q969J2 545 aaPredicted RBP9.86□□□□□ -0.83
SMC3-202ENST00000462899 CHMP4AQ9BY43 222 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
SMC3-202ENST00000462899 MYPNQ86TC9 1320 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 FRMPD3Q5JV73 1810 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 APAF1O14727 1248 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 FARP2O94887 1054 aaPredicted RBP9.85□□□□□ -0.83
SMC3-202ENST00000462899 HDLBPQ00341 1268 aaKnown RBP9.85□□□□□ -0.83
SMC3-202ENST00000462899 PRKCZQ05513 592 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 CALD1Q05682 793 aaKnown RBP9.85□□□□□ -0.83
SMC3-202ENST00000462899 PPATQ06203 517 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMC3-202ENST00000462899 FAM83AQ86UY5 434 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 LINS1Q8NG48 757 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 U2AF1L4Q8WU68 220 aaKnown RBP9.85□□□□□ -0.83
SMC3-202ENST00000462899 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
SMC3-202ENST00000462899 WRNIP1Q96S55 665 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 CPA4Q9UI42 421 aa9.85□□□□□ -0.83
SMC3-202ENST00000462899 NR2E3Q9Y5X4 410 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms