RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 SNRKQ9NRH2 765 aa23.09■■□□□ 1.29
COL9A3-203ENST00000462700 ANGEL1Q9UNK9 670 aaKnown RBP23.09■■□□□ 1.29
COL9A3-203ENST00000462700 FZD1Q9UP38 647 aa23.09■■□□□ 1.29
COL9A3-203ENST00000462700 MAP3K11Q16584 847 aa23.08■■□□□ 1.29
COL9A3-203ENST00000462700 FAM83AQ86UY5 434 aa23.08■■□□□ 1.29
COL9A3-203ENST00000462700 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
COL9A3-203ENST00000462700 CDAN1Q8IWY9 1227 aa23.08■■□□□ 1.29
COL9A3-203ENST00000462700 FAM163AQ96GL9 167 aaPredicted RBP23.08■■□□□ 1.29
COL9A3-203ENST00000462700 PPP1R12BO60237 982 aaPredicted RBP23.07■■□□□ 1.28
COL9A3-203ENST00000462700 LDLRAD1Q5T700 205 aa23.07■■□□□ 1.28
COL9A3-203ENST00000462700 ZNF384Q8TF68 577 aa23.07■■□□□ 1.28
COL9A3-203ENST00000462700 NSUN4Q96CB9 384 aaKnown RBP23.07■■□□□ 1.28
COL9A3-203ENST00000462700 ZIC5Q96T25 663 aa23.07■■□□□ 1.28
COL9A3-203ENST00000462700 RAI14Q9P0K7 980 aa23.07■■□□□ 1.28
COL9A3-203ENST00000462700 MROH7-TTC4A0A0A0MT08 1334 aa23.07■■□□□ 1.28
COL9A3-203ENST00000462700 CYP2E1P05181 493 aaPredicted RBP23.06■■□□□ 1.28
COL9A3-203ENST00000462700 ZAP70P43403 619 aa23.06■■□□□ 1.28
COL9A3-203ENST00000462700 AIDAQ96BJ3 306 aa23.06■■□□□ 1.28
COL9A3-203ENST00000462700 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
COL9A3-203ENST00000462700 USP40Q9NVE5 1235 aa23.06■■□□□ 1.28
COL9A3-203ENST00000462700 LRP2BPQ9P2M1 347 aa23.06■■□□□ 1.28
COL9A3-203ENST00000462700 RPAP1Q9BWH6 1393 aaPredicted RBP23.05■■□□□ 1.28
COL9A3-203ENST00000462700 FOXN1O15353 648 aa23.05■■□□□ 1.28
COL9A3-203ENST00000462700 GSTO1P78417 241 aa23.05■■□□□ 1.28
COL9A3-203ENST00000462700 IFIT2P09913 472 aaKnown RBP23.04■■□□□ 1.28
COL9A3-203ENST00000462700 BTDP43251 543 aa23.04■■□□□ 1.28
COL9A3-203ENST00000462700 NFIAQ12857 509 aa23.04■■□□□ 1.28
COL9A3-203ENST00000462700 PCDHB15Q9Y5E8 787 aa23.04■■□□□ 1.28
COL9A3-203ENST00000462700 AKAP11Q9UKA4 1901 aa23.04■■□□□ 1.28
COL9A3-203ENST00000462700 USP2O75604 605 aaPredicted RBP23.03■■□□□ 1.28
COL9A3-203ENST00000462700 IREB2P48200 963 aaKnown RBP23.03■■□□□ 1.28
COL9A3-203ENST00000462700 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
COL9A3-203ENST00000462700 FAM151AQ8WW52 585 aa23.03■■□□□ 1.28
COL9A3-203ENST00000462700 LRRCC1Q9C099 1032 aa23.03■■□□□ 1.28
COL9A3-203ENST00000462700 FAM198AQ9UFP1 575 aa23.03■■□□□ 1.28
COL9A3-203ENST00000462700 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 MYH2Q9UKX2 1941 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 GPR75-ASB3A0A0A6YYF3 556 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 LDHCP07864 332 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 BEGAINQ9BUH8 593 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 BCL11AQ9H165 835 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 DCTPP1Q9H773 170 aa23.02■■□□□ 1.28
COL9A3-203ENST00000462700 PIH1D3Q9NQM4 214 aaKnown RBP23.02■■□□□ 1.28
COL9A3-203ENST00000462700 UNCXA6NJT0 531 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 IGSF3O75054 1194 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 TCP10Q12799 353 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 IDI2Q9BXS1 227 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 NDUFB9Q9Y6M9 179 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 MAST2Q6P0Q8 1798 aa23.01■■□□□ 1.27
COL9A3-203ENST00000462700 RHBDL3P58872 404 aa23■■□□□ 1.27
COL9A3-203ENST00000462700 NAA16Q6N069 864 aaPredicted RBP23■■□□□ 1.27
COL9A3-203ENST00000462700 HOOK2Q96ED9 719 aa23■■□□□ 1.27
COL9A3-203ENST00000462700 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
COL9A3-203ENST00000462700 WDHD1O75717 1129 aaPredicted RBP22.99■■□□□ 1.27
COL9A3-203ENST00000462700 CTCFP49711 727 aaPredicted RBP22.99■■□□□ 1.27
COL9A3-203ENST00000462700 RGS3P49796 1198 aa22.99■■□□□ 1.27
COL9A3-203ENST00000462700 ANKRD13AQ8IZ07 590 aa22.99■■□□□ 1.27
COL9A3-203ENST00000462700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL9A3-203ENST00000462700 CLMNQ96JQ2 1002 aa22.99■■□□□ 1.27
COL9A3-203ENST00000462700 ENTPD3O75355 529 aa22.98■■□□□ 1.27
COL9A3-203ENST00000462700 ZFPM1Q8IX07 1006 aa22.98■■□□□ 1.27
COL9A3-203ENST00000462700 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
COL9A3-203ENST00000462700 ANTXR1Q9H6X2 564 aa22.98■■□□□ 1.27
COL9A3-203ENST00000462700 MAP4K4O95819 1239 aaPredicted RBP22.97■■□□□ 1.27
COL9A3-203ENST00000462700 HSPA8P11142 646 aaKnown RBP22.97■■□□□ 1.27
COL9A3-203ENST00000462700 MKRN3Q13064 507 aaKnown RBP22.97■■□□□ 1.27
COL9A3-203ENST00000462700 SPRYD7Q5W111 196 aa22.97■■□□□ 1.27
COL9A3-203ENST00000462700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.97■■□□□ 1.27
COL9A3-203ENST00000462700 CSRNP1Q96S65 589 aa22.97■■□□□ 1.27
COL9A3-203ENST00000462700 DDX4Q9NQI0 724 aaKnown RBP22.97■■□□□ 1.27
COL9A3-203ENST00000462700 CA12O43570 354 aa22.96■■□□□ 1.27
COL9A3-203ENST00000462700 IDH1O75874 414 aaKnown RBP22.96■■□□□ 1.27
COL9A3-203ENST00000462700 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
COL9A3-203ENST00000462700 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-203ENST00000462700 ADGRA1Q86SQ6 560 aa22.96■■□□□ 1.27
COL9A3-203ENST00000462700 REM2Q8IYK8 340 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-203ENST00000462700 NOL10Q9BSC4 688 aaKnown RBP22.96■■□□□ 1.27
COL9A3-203ENST00000462700 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-203ENST00000462700 PICALMQ13492 652 aa22.95■■□□□ 1.26
COL9A3-203ENST00000462700 WNK4Q96J92 1243 aa22.95■■□□□ 1.26
COL9A3-203ENST00000462700 OTOFQ9HC10 1997 aa22.95■■□□□ 1.26
COL9A3-203ENST00000462700 NPM3O75607 178 aaKnown RBP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 BAG3O95817 575 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 ZBTB48P10074 688 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 ATP5JP18859 108 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 LBX1P52954 281 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 MAP3K9P80192 1104 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 TTF1Q15361 905 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 DNAJC2Q99543 621 aaKnown RBP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 ZNF341Q9BYN7 854 aa22.94■■□□□ 1.26
COL9A3-203ENST00000462700 AATFQ9NY61 560 aaKnown RBP eCLIP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
COL9A3-203ENST00000462700 ATRNL1Q5VV63 1379 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 PPP4CP60510 307 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 MAP3K12Q12852 859 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 AAMPQ13685 434 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 VGLL4Q14135 290 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 COL13A1Q5TAT6 717 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-203ENST00000462700 SH3BP5LQ7L8J4 393 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms