RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 NID1P14543 1247 aa10.35□□□□□ -0.75
UBE4B-204ENST00000462658 CEBPAP49715 358 aaPredicted RBP10.35□□□□□ -0.75
UBE4B-204ENST00000462658 ATP2B2Q01814 1243 aa10.35□□□□□ -0.75
UBE4B-204ENST00000462658 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
UBE4B-204ENST00000462658 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.35□□□□□ -0.75
UBE4B-204ENST00000462658 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
UBE4B-204ENST00000462658 CCDC9Q9Y3X0 531 aaKnown RBP10.35□□□□□ -0.75
UBE4B-204ENST00000462658 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
UBE4B-204ENST00000462658 WASHC2CQ9Y4E1 1318 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 MROH1Q8NDA8 1641 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
UBE4B-204ENST00000462658 METTL12A8MUP2 240 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 KIAA0319Q5VV43 1072 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 ALG1LQ6GMV1 187 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 NXPE3Q969Y0 559 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 EHD4Q9H223 541 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 LIN7BQ9HAP6 207 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 MKL2Q9ULH7 1088 aa10.34□□□□□ -0.75
UBE4B-204ENST00000462658 IL22RA1Q8N6P7 574 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 TMEM102Q8N9M5 508 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-204ENST00000462658 ASAP3Q8TDY4 903 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 TCF12Q99081 682 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 BCL2L13Q9BXK5 485 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 LMTK2Q8IWU2 1503 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
UBE4B-204ENST00000462658 MROH2AA6NES4 1674 aa10.32□□□□□ -0.76
UBE4B-204ENST00000462658 BAG6P46379 1132 aa10.32□□□□□ -0.76
UBE4B-204ENST00000462658 DMRTC2Q8IXT2 367 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-204ENST00000462658 RGS22Q8NE09 1264 aa10.32□□□□□ -0.76
UBE4B-204ENST00000462658 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-204ENST00000462658 DUSP9Q99956 384 aaKnown RBP10.32□□□□□ -0.76
UBE4B-204ENST00000462658 SH2B1Q9NRF2 756 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-204ENST00000462658 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
UBE4B-204ENST00000462658 TET3O43151 1660 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 PRPF40AO75400 957 aaKnown RBP10.31□□□□□ -0.76
UBE4B-204ENST00000462658 CDC25BP30305 580 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 GRM2Q14416 872 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 BEND7Q8N7W2 519 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-204ENST00000462658 FBF1Q8TES7 1133 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 GIPC2Q8TF65 315 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 PLVAPQ9BX97 442 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 PTPRTO14522 1441 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 PREX1Q8TCU6 1659 aa10.31□□□□□ -0.76
UBE4B-204ENST00000462658 STRCQ7RTU9 1775 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 GNB5O14775 395 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 PTPRAP18433 802 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 GRIA4P48058 902 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 SPRED3Q2MJR0 410 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 WFDC8Q8IUA0 241 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 CCNJLQ8IV13 435 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 GLIS3Q8NEA6 775 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 BCO2Q9BYV7 579 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 BHLHE41Q9C0J9 482 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-204ENST00000462658 E9PCH4 1651 aa10.3□□□□□ -0.76
UBE4B-204ENST00000462658 CDC27P30260 824 aa10.29□□□□□ -0.76
UBE4B-204ENST00000462658 HSPA2P54652 639 aa10.29□□□□□ -0.76
UBE4B-204ENST00000462658 TXNDC11Q6PKC3 985 aa10.29□□□□□ -0.76
UBE4B-204ENST00000462658 ABCC3O15438 1527 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 EFCAB6Q5THR3 1501 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 EPHA1P21709 976 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-204ENST00000462658 FAM161BQ96MY7 647 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 OSBPL7Q9BZF2 842 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 ADAM19Q9H013 955 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 MUC3BQ9H195 1237 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 PARP2Q9UGN5 583 aa10.28□□□□□ -0.76
UBE4B-204ENST00000462658 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
UBE4B-204ENST00000462658 NPATQ14207 1427 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 LINC01387J3KSC0 135 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 ILDR2Q71H61 639 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 SOX13Q9UN79 622 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 TRPM2O94759 1503 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 CEP152O94986 1710 aa10.27□□□□□ -0.77
UBE4B-204ENST00000462658 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 A0A096LPE4 126 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 A0A1W2PPZ6 126 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 NBPF8Q3BBV2 869 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 BSNDQ8WZ55 320 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 PPME1Q9Y570 386 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 ZMYM3Q14202 1370 aa10.26□□□□□ -0.77
UBE4B-204ENST00000462658 TMEM238LA0A1B0GVL6 79 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 COL8A1P27658 744 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 FCGRTP55899 365 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 TRAK1Q9UPV9 953 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 MYO3AQ8NEV4 1616 aa10.25□□□□□ -0.77
UBE4B-204ENST00000462658 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms