RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	TTC39A	Q5SRH9	613 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	CDC42EP5	Q6NZY7	148 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	ARMC9	Q7Z3E5	817 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	CDAN1	Q8IWY9	1227 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	KIF1BP	Q96EK5	621 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	TMEM39B	Q9GZU3	492 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	TLR7	Q9NYK1	1049 aa	Known RBP	10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	TMOD2	Q9NZR1	351 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	ABCF2	Q9UG63	623 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	RFX7	Q2KHR2	1363 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	IGSF3	O75054	1194 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	MECOM	Q03112	1051 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	TTLL12	Q14166	644 aa	Predicted RBP	10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	TBC1D9	Q6ZT07	1266 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	ERICH6	Q7L0X2	663 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	DZIP1	Q86YF9	867 aa	Known RBP	10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	SLF2	Q8IX21	1173 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	NSUN4	Q96CB9	384 aa	Known RBP	10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	ANGEL1	Q9UNK9	670 aa	Known RBP	10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	FZD1	Q9UP38	647 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	MROH7-TTC4	A0A0A0MT08	1334 aa		10.24	□□□□□ -0.77
ITSN1-222	ENST00000462212	GPR75-ASB3	A0A0A6YYF3	556 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	USP2	O75604	605 aa	Predicted RBP	10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	CYP2E1	P05181	493 aa	Predicted RBP	10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	CTCF	P49711	727 aa	Predicted RBP	10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	KIF23	Q02241	960 aa	Predicted RBP	10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	NFIA	Q12857	509 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	PRKG1	Q13976	671 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	AACS	Q86V21	672 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	AIDA	Q96BJ3	306 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	IDI2	Q9BXS1	227 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	IL1RAPL2	Q9NP60	686 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	FAM198A	Q9UFP1	575 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	OTOF	Q9HC10	1997 aa		10.23	□□□□□ -0.77
ITSN1-222	ENST00000462212	LAMB1	P07942	1786 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	MAST2	Q6P0Q8	1798 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	CA12	O43570	354 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	WDHD1	O75717	1129 aa	Predicted RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	HSPA8	P11142	646 aa	Known RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	BTD	P43251	543 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	ZAP70	P43403	619 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	IREB2	P48200	963 aa	Known RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	RHBDL3	P58872	404 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	GSTO1	P78417	241 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	REM2	Q8IYK8	340 aa	Predicted RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	CLASRP	Q8N2M8	674 aa	Known RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	FAM151A	Q8WW52	585 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	CSRNP1	Q96S65	589 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	PRDM10	Q9NQV6	1147 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	SNRK	Q9NRH2	765 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	USP40	Q9NVE5	1235 aa		10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	RNF216	Q9NWF9	866 aa	Predicted RBP	10.22	□□□□□ -0.77
ITSN1-222	ENST00000462212	ENTPD3	O75355	529 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	NPM3	O75607	178 aa	Known RBP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	MAP4K4	O95819	1239 aa	Predicted RBP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	LDHC	P07864	332 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	SPRYD7	Q5W111	196 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	ANKRD13A	Q8IZ07	590 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	HOOK2	Q96ED9	719 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	CLMN	Q96JQ2	1002 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	BEGAIN	Q9BUH8	593 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	DCTPP1	Q9H773	170 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	PIH1D3	Q9NQM4	214 aa	Known RBP	10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	RAI14	Q9P0K7	980 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	LRP2BP	Q9P2M1	347 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	PCDHB15	Q9Y5E8	787 aa		10.21	□□□□□ -0.77
ITSN1-222	ENST00000462212	ATRNL1	Q5VV63	1379 aa		10.21	□□□□□ -0.78
ITSN1-222	ENST00000462212	DOCK2	Q92608	1830 aa		10.21	□□□□□ -0.78
ITSN1-222	ENST00000462212	APBB1	O00213	710 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	ZBTB48	P10074	688 aa	Predicted RBP	10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	TM4SF4	P48230	202 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	RGS3	P49796	1198 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	LBX1	P52954	281 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	TCP10	Q12799	353 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	ZFPM1	Q8IX07	1006 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	SLC10A4	Q96EP9	437 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	WNK4	Q96J92	1243 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	LRRCC1	Q9C099	1032 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	DDX4	Q9NQI0	724 aa	Known RBP	10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	SAGE1	Q9NXZ1	904 aa		10.2	□□□□□ -0.78
ITSN1-222	ENST00000462212	COL2A1	P02458	1487 aa	Predicted RBP	10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	IFIT2	P09913	472 aa	Known RBP	10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	PPP4C	P60510	307 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	MAP3K9	P80192	1104 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	MAP3K10	Q02779	954 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	DCAF15	Q66K64	600 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	NAA16	Q6N069	864 aa	Predicted RBP	10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	TMED8	Q6PL24	325 aa	Predicted RBP	10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	SH3BP5L	Q7L8J4	393 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	ADGRA1	Q86SQ6	560 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	CRBN	Q96SW2	442 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	ANTXR1	Q9H6X2	564 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	ZNF112	Q9UJU3	913 aa		10.19	□□□□□ -0.78
ITSN1-222	ENST00000462212	AK9	Q5TCS8	1911 aa		10.18	□□□□□ -0.78

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