RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 BCL11AQ9H165 835 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 NSD2O96028 1365 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 NPC1L1Q9UHC9 1359 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 ARSDP51689 593 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 EVA1CP58658 441 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 SCARF1Q14162 830 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 TSNAXIP1Q2TAA8 658 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 HSP90AB2PQ58FF8 381 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 ZNF787Q6DD87 383 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 LRRC69Q6ZNQ3 347 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 TMC4Q7Z404 712 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 ANKRD24Q8TF21 1146 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 CRB1P82279 1406 aa10.84□□□□□ -0.67
ECHDC1-212ENST00000461239 RTL1A6NKG5 1358 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 GRNP28799 593 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 AMPHP49418 695 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 DAB2P98082 770 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 TRIP4Q15650 581 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 ARSJQ5FYB0 599 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 ALG1LQ6GMV1 187 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 USP20Q9Y2K6 914 aa10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 BLMP54132 1417 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-212ENST00000461239 A0A1W2PNR3 127 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 EIF1AYO14602 144 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 TYRO3Q06418 890 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 TCP11L2Q8N4U5 519 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 LTV1Q96GA3 475 aaPredicted RBP10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 CRISPLD1Q9H336 500 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 KCNMB2Q9Y691 235 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 SMG6Q86US8 1419 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 THSD7AQ9UPZ6 1657 aa10.82□□□□□ -0.68
ECHDC1-212ENST00000461239 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 INSRP06213 1382 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 FLT4P35916 1363 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 IGSF3O75054 1194 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 CNGB1Q14028 1251 aaPredicted RBP10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 XKR5Q6UX68 686 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 FBF1Q8TES7 1133 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 ZFP42Q96MM3 310 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 CARD10Q9BWT7 1032 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 DNAJC25Q9H1X3 360 aa10.81□□□□□ -0.68
ECHDC1-212ENST00000461239 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-212ENST00000461239 NEUROD4Q9HD90 331 aa10.8□□□□□ -0.68
ECHDC1-212ENST00000461239 DNMT3LQ9UJW3 386 aa10.8□□□□□ -0.68
ECHDC1-212ENST00000461239 DISP2A7MBM2 1401 aa10.8□□□□□ -0.68
ECHDC1-212ENST00000461239 TTC16Q8NEE8 873 aa10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 GPAMQ9HCL2 828 aa10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 NLRP2Q9NX02 1062 aa10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 FOXD3Q9UJU5 478 aaPredicted RBP10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 DYRK1BQ9Y463 629 aa10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
ECHDC1-212ENST00000461239 RGPD2P0DJD1 1756 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 SORBS3O60504 671 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 TNFRSF21O75509 655 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 NEFLP07196 543 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 GNA15P30679 374 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 MTHFSP49914 203 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 PSMD2Q13200 908 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 EIF4A2Q14240 407 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 PDE12Q6L8Q7 609 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 USHBP1Q8N6Y0 703 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 RUBCNLQ9H714 662 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 MRS2Q9HD23 443 aa10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 FAM208AQ9UK61 1670 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-212ENST00000461239 NCAPD2Q15021 1401 aa10.77□□□□□ -0.68
ECHDC1-212ENST00000461239 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 CPNE3O75131 537 aaKnown RBP10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 DGAT1O75907 488 aa10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 FNDC3AQ9Y2H6 1198 aaKnown RBP10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 PARD3Q8TEW0 1356 aa10.77□□□□□ -0.69
ECHDC1-212ENST00000461239 SCAMP3O14828 347 aaKnown RBP10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 F11P03951 625 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 IL13P35225 146 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
ECHDC1-212ENST00000461239 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 COL3A1P02461 1466 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms