RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
COL5A3-202ENST00000461214 HUNKP57058 714 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 MAP3K12Q12852 859 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 CERS5Q8N5B7 392 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 ANTXR1Q9H6X2 564 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 PIH1D3Q9NQM4 214 aaKnown RBP17.43■□□□□ 0.38
COL5A3-202ENST00000461214 KCNQ5Q9NR82 932 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 ABCF2Q9UG63 623 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 NDUFB9Q9Y6M9 179 aa17.43■□□□□ 0.38
COL5A3-202ENST00000461214 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
COL5A3-202ENST00000461214 PRDX5P30044 214 aa17.42■□□□□ 0.38
COL5A3-202ENST00000461214 ZSCAN25Q6NSZ9 544 aa17.42■□□□□ 0.38
COL5A3-202ENST00000461214 DZIP1Q86YF9 867 aaKnown RBP17.42■□□□□ 0.38
COL5A3-202ENST00000461214 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
COL5A3-202ENST00000461214 GMLQ99445 158 aa17.42■□□□□ 0.38
COL5A3-202ENST00000461214 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
COL5A3-202ENST00000461214 JAG2Q9Y219 1238 aa17.42■□□□□ 0.38
COL5A3-202ENST00000461214 TRPA1O75762 1119 aa17.41■□□□□ 0.38
COL5A3-202ENST00000461214 IDH1O75874 414 aaKnown RBP17.41■□□□□ 0.38
COL5A3-202ENST00000461214 SDSP20132 328 aa17.41■□□□□ 0.38
COL5A3-202ENST00000461214 HDLBPQ00341 1268 aaKnown RBP17.41■□□□□ 0.38
COL5A3-202ENST00000461214 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
COL5A3-202ENST00000461214 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
COL5A3-202ENST00000461214 DPF2Q92785 391 aa17.41■□□□□ 0.38
COL5A3-202ENST00000461214 HIP1O00291 1037 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-202ENST00000461214 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-202ENST00000461214 GSTO1P78417 241 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 DLK2Q6UY11 383 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 RAI14Q9P0K7 980 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
COL5A3-202ENST00000461214 ADD2P35612 726 aa17.39■□□□□ 0.37
COL5A3-202ENST00000461214 MECOMQ03112 1051 aa17.39■□□□□ 0.37
COL5A3-202ENST00000461214 USP48Q86UV5 1035 aa17.39■□□□□ 0.37
COL5A3-202ENST00000461214 NSUN4Q96CB9 384 aaKnown RBP17.39■□□□□ 0.37
COL5A3-202ENST00000461214 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
COL5A3-202ENST00000461214 RNF186Q9NXI6 227 aa17.39■□□□□ 0.37
COL5A3-202ENST00000461214 TTF2Q9UNY4 1162 aaKnown RBP17.39■□□□□ 0.37
COL5A3-202ENST00000461214 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 PDE6AP16499 860 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
COL5A3-202ENST00000461214 UBE3CQ15386 1083 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 CTU1Q7Z7A3 348 aaKnown RBP17.38■□□□□ 0.37
COL5A3-202ENST00000461214 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 MROH7-TTC4A0A0A0MT08 1334 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 GAKO14976 1311 aa17.38■□□□□ 0.37
COL5A3-202ENST00000461214 LDHCP07864 332 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-202ENST00000461214 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-202ENST00000461214 GRIK5Q16478 980 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-202ENST00000461214 RGMBQ6NW40 437 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 HHIPL2Q6UWX4 724 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
COL5A3-202ENST00000461214 RAD50Q92878 1312 aa17.37■□□□□ 0.37
COL5A3-202ENST00000461214 SIPA1L1O43166 1804 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 TCRBV5S4A2TA0A5A2 114 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
COL5A3-202ENST00000461214 CDC45O75419 566 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 MAGEB6Q8N7X4 407 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 ZNF384Q8TF68 577 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 APPBP2Q92624 585 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
COL5A3-202ENST00000461214 DIAPH3Q9NSV4 1193 aa17.36■□□□□ 0.37
COL5A3-202ENST00000461214 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 FAM155AB1AL88 458 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-202ENST00000461214 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-202ENST00000461214 ZNF157P51786 506 aaPredicted RBP17.35■□□□□ 0.37
COL5A3-202ENST00000461214 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 MICALL2Q8IY33 904 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 MTMR14Q8NCE2 650 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 ZNF532Q9HCE3 1301 aa17.35■□□□□ 0.37
COL5A3-202ENST00000461214 CRKP46108 304 aa17.34■□□□□ 0.37
COL5A3-202ENST00000461214 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
COL5A3-202ENST00000461214 ATAD5Q96QE3 1844 aa17.34■□□□□ 0.37
COL5A3-202ENST00000461214 NOL10Q9BSC4 688 aaKnown RBP17.34■□□□□ 0.37
COL5A3-202ENST00000461214 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
COL5A3-202ENST00000461214 H7C1D1 291 aa17.33■□□□□ 0.36
COL5A3-202ENST00000461214 PLCG2P16885 1265 aa17.33■□□□□ 0.36
COL5A3-202ENST00000461214 CYP7A1P22680 504 aa17.33■□□□□ 0.36
COL5A3-202ENST00000461214 DIXDC1Q155Q3 683 aa17.33■□□□□ 0.36
COL5A3-202ENST00000461214 HABP4Q5JVS0 413 aaKnown RBP17.33■□□□□ 0.36
COL5A3-202ENST00000461214 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.36
COL5A3-202ENST00000461214 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
COL5A3-202ENST00000461214 HELLSQ9NRZ9 838 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms