RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 GMLQ99445 158 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 SNX14Q9Y5W7 946 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 MYO3BQ8WXR4 1341 aa13.02□□□□□ -0.33
CSDC2-202ENST00000460790 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
CSDC2-202ENST00000460790 FZD9O00144 591 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 APPP05067 770 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 LMNB1P20700 586 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 TNIP1Q15025 636 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 KIAA0825Q8IV33 1275 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
CSDC2-202ENST00000460790 DAGLAQ9Y4D2 1042 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
CSDC2-202ENST00000460790 CYP21A2P08686 494 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 PLCG2P16885 1265 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
CSDC2-202ENST00000460790 ANP32AP39687 249 aaKnown RBP13□□□□□ -0.33
CSDC2-202ENST00000460790 BTDP43251 543 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 SCNN1DP51172 638 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 RABEP1Q15276 862 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 TEKT1Q969V4 418 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 CRNKL1Q9BZJ0 848 aaKnown RBP13□□□□□ -0.33
CSDC2-202ENST00000460790 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
CSDC2-202ENST00000460790 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
CSDC2-202ENST00000460790 CRKP46108 304 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 EIF6P56537 245 aaKnown RBP12.99□□□□□ -0.33
CSDC2-202ENST00000460790 RHBDL3P58872 404 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
CSDC2-202ENST00000460790 SH3RF3Q8TEJ3 882 aaPredicted RBP12.99□□□□□ -0.33
CSDC2-202ENST00000460790 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 ZDHHC15Q96MV8 337 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 ATP8A2Q9NTI2 1148 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 ECM29Q5VYK3 1845 aa12.99□□□□□ -0.33
CSDC2-202ENST00000460790 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 FOCADQ5VW36 1801 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 MMP14P50281 582 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 KRT32Q14532 448 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 IMMTQ16891 758 aaKnown RBP12.98□□□□□ -0.33
CSDC2-202ENST00000460790 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 NAPBQ9H115 298 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
CSDC2-202ENST00000460790 MKRN1Q9UHC7 482 aaKnown RBP12.98□□□□□ -0.33
CSDC2-202ENST00000460790 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
CSDC2-202ENST00000460790 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 MYH1P12882 1939 aa12.98□□□□□ -0.33
CSDC2-202ENST00000460790 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 ZNF213O14771 459 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 RPS12P25398 132 aaKnown RBP12.97□□□□□ -0.33
CSDC2-202ENST00000460790 PSMA5P28066 241 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 TDO2P48775 406 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 GPR162Q16538 588 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 ADCK5Q3MIX3 580 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 OGFOD1Q8N543 542 aa12.97□□□□□ -0.33
CSDC2-202ENST00000460790 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 USP5P45974 858 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSDC2-202ENST00000460790 HAND2P61296 217 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 CDC42EP5Q6NZY7 148 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 DPF2Q92785 391 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
CSDC2-202ENST00000460790 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 USP17L21D6R901 530 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 E7EWF7 191 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 NEK4P51957 841 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 MTMR14Q8NCE2 650 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 SNX21Q969T3 373 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
CSDC2-202ENST00000460790 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
CSDC2-202ENST00000460790 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 ANAPC4Q9UJX5 808 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
CSDC2-202ENST00000460790 ZNF541Q9H0D2 1346 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
CSDC2-202ENST00000460790 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
CSDC2-202ENST00000460790 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
CSDC2-202ENST00000460790 PPARAQ07869 468 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 RNF181Q9P0P0 153 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 CYP46A1Q9Y6A2 500 aa12.94□□□□□ -0.34
CSDC2-202ENST00000460790 GJA3Q9Y6H8 435 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms