RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 WRNIP1Q96S55 665 aa13.69□□□□□ -0.22
VAMP7-203ENST00000460621 FAM198AQ9UFP1 575 aa13.69□□□□□ -0.22
VAMP7-203ENST00000460621 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
VAMP7-203ENST00000460621 SUGT1Q9Y2Z0 365 aa13.69□□□□□ -0.22
VAMP7-203ENST00000460621 CSADQ9Y600 493 aa13.69□□□□□ -0.22
VAMP7-203ENST00000460621 PTCH2Q9Y6C5 1203 aa13.69□□□□□ -0.22
VAMP7-203ENST00000460621 PHKA1P46020 1223 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 ZNF112Q9UJU3 913 aa13.68□□□□□ -0.22
VAMP7-203ENST00000460621 SLC5A1P13866 664 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 TCP10Q12799 353 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 PPIL2Q13356 520 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 FAM151AQ8WW52 585 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 MEIS3Q99687 375 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
VAMP7-203ENST00000460621 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
VAMP7-203ENST00000460621 TLR2O60603 784 aa13.66□□□□□ -0.22
VAMP7-203ENST00000460621 CIAO1O76071 339 aa13.66□□□□□ -0.22
VAMP7-203ENST00000460621 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
VAMP7-203ENST00000460621 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
VAMP7-203ENST00000460621 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
VAMP7-203ENST00000460621 SH3BP5LQ7L8J4 393 aa13.66□□□□□ -0.22
VAMP7-203ENST00000460621 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
VAMP7-203ENST00000460621 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
VAMP7-203ENST00000460621 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
VAMP7-203ENST00000460621 ADGRA2Q96PE1 1338 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
VAMP7-203ENST00000460621 CETPP11597 493 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 TIMM10P62072 90 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 KCNH4Q9UQ05 1017 aa13.65□□□□□ -0.22
VAMP7-203ENST00000460621 RBBP6Q7Z6E9 1792 aaKnown RBP13.65□□□□□ -0.22
VAMP7-203ENST00000460621 MAST3O60307 1309 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 PHF20L1A8MW92 1017 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-203ENST00000460621 LACTBP83111 547 aaPredicted RBP13.64□□□□□ -0.23
VAMP7-203ENST00000460621 PPATQ06203 517 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 SNAPC2Q13487 334 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 COPRSQ9NQ92 184 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 CPA4Q9UI42 421 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
VAMP7-203ENST00000460621 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
VAMP7-203ENST00000460621 DCAF15Q66K64 600 aa13.63□□□□□ -0.23
VAMP7-203ENST00000460621 GPAT2Q6NUI2 795 aa13.63□□□□□ -0.23
VAMP7-203ENST00000460621 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
VAMP7-203ENST00000460621 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
VAMP7-203ENST00000460621 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 PDHXO00330 501 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 ZBTB22O15209 634 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 LDHBP07195 334 aaKnown RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 IL15P40933 162 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 RASGRF1Q13972 1273 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 MTFR1Q15390 333 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 TRIM47Q96LD4 638 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 ZCCHC17Q9NP64 241 aaKnown RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-203ENST00000460621 GAKO14976 1311 aa13.62□□□□□ -0.23
VAMP7-203ENST00000460621 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
VAMP7-203ENST00000460621 RGS3P49796 1198 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 TFCP2Q12800 502 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 SLC9C1Q4G0N8 1177 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 IDI2Q9BXS1 227 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
VAMP7-203ENST00000460621 CYP2C8P10632 490 aa13.6□□□□□ -0.23
VAMP7-203ENST00000460621 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
VAMP7-203ENST00000460621 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
VAMP7-203ENST00000460621 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
VAMP7-203ENST00000460621 SHISA4Q96DD7 197 aa13.6□□□□□ -0.23
VAMP7-203ENST00000460621 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
VAMP7-203ENST00000460621 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
VAMP7-203ENST00000460621 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
VAMP7-203ENST00000460621 CEP290O15078 2479 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 MYH2Q9UKX2 1941 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 SEMA3EO15041 775 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-203ENST00000460621 BCRP11274 1271 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 OSBPP22059 807 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 PSMC4P43686 418 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 RHBDL3P58872 404 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-203ENST00000460621 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
VAMP7-203ENST00000460621 GNL3LQ9NVN8 582 aaKnown RBP13.59□□□□□ -0.23
VAMP7-203ENST00000460621 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms