RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 WBP1LQ9NX94 342 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 PPP4R2Q9NY27 417 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 ADM5C9JUS6 153 aa27.29■■□□□ 1.96
C9orf3-209ENST00000460573 LDHCP07864 332 aa27.29■■□□□ 1.96
C9orf3-209ENST00000460573 PDE1AP54750 535 aa27.29■■□□□ 1.96
C9orf3-209ENST00000460573 MECOMQ03112 1051 aa27.29■■□□□ 1.96
C9orf3-209ENST00000460573 NSUN4Q96CB9 384 aaKnown RBP27.29■■□□□ 1.96
C9orf3-209ENST00000460573 FAM163AQ96GL9 167 aaPredicted RBP27.29■■□□□ 1.96
C9orf3-209ENST00000460573 AOX1Q06278 1338 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 HUNKP57058 714 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 MAP3K12Q12852 859 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 NBPF9Q3BBW0 867 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 PI4K2BQ8TCG2 481 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 PRMT6Q96LA8 375 aaPredicted RBP27.28■■□□□ 1.96
C9orf3-209ENST00000460573 PIH1D3Q9NQM4 214 aaKnown RBP27.28■■□□□ 1.96
C9orf3-209ENST00000460573 NDUFB9Q9Y6M9 179 aa27.28■■□□□ 1.96
C9orf3-209ENST00000460573 PITPNM2Q9BZ72 1349 aa27.27■■□□□ 1.96
C9orf3-209ENST00000460573 GOLIM4O00461 696 aa27.27■■□□□ 1.96
C9orf3-209ENST00000460573 ANGEL2Q5VTE6 544 aaKnown RBP27.27■■□□□ 1.96
C9orf3-209ENST00000460573 OSBPL3Q9H4L5 887 aa27.27■■□□□ 1.96
C9orf3-209ENST00000460573 ANTXR1Q9H6X2 564 aa27.27■■□□□ 1.96
C9orf3-209ENST00000460573 GBA2Q9HCG7 927 aaPredicted RBP27.27■■□□□ 1.96
C9orf3-209ENST00000460573 IDH1O75874 414 aaKnown RBP27.26■■□□□ 1.95
C9orf3-209ENST00000460573 DIXDC1Q155Q3 683 aa27.26■■□□□ 1.95
C9orf3-209ENST00000460573 TSHZ3Q63HK5 1081 aa27.26■■□□□ 1.95
C9orf3-209ENST00000460573 HHIPL1Q96JK4 782 aa27.26■■□□□ 1.95
C9orf3-209ENST00000460573 DAGLAQ9Y4D2 1042 aa27.26■■□□□ 1.95
C9orf3-209ENST00000460573 GAKO14976 1311 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 AOC2O75106 756 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 MAP2K2P36507 400 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 LBX1P52954 281 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 NAA16Q6N069 864 aaPredicted RBP27.25■■□□□ 1.95
C9orf3-209ENST00000460573 PLEKHM2Q8IWE5 1019 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 PRDM10Q9NQV6 1147 aa27.25■■□□□ 1.95
C9orf3-209ENST00000460573 MROH7-TTC4A0A0A0MT08 1334 aa27.24■■□□□ 1.95
C9orf3-209ENST00000460573 APOBEC3HQ6NTF7 200 aaKnown RBP27.24■■□□□ 1.95
C9orf3-209ENST00000460573 DLK2Q6UY11 383 aa27.24■■□□□ 1.95
C9orf3-209ENST00000460573 PCDHAC2Q9Y5I4 1007 aa27.24■■□□□ 1.95
C9orf3-209ENST00000460573 ZNF384Q8TF68 577 aa27.23■■□□□ 1.95
C9orf3-209ENST00000460573 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.23■■□□□ 1.95
C9orf3-209ENST00000460573 ASTN2O75129 1339 aaPredicted RBP27.22■■□□□ 1.95
C9orf3-209ENST00000460573 SPDYE2Q495Y8 402 aa27.22■■□□□ 1.95
C9orf3-209ENST00000460573 APOBEC3FQ8IUX4 373 aaKnown RBP27.22■■□□□ 1.95
C9orf3-209ENST00000460573 DOCK2Q92608 1830 aa27.22■■□□□ 1.95
C9orf3-209ENST00000460573 THSD7BQ9C0I4 1608 aa27.22■■□□□ 1.95
C9orf3-209ENST00000460573 MAST2Q6P0Q8 1798 aa27.22■■□□□ 1.95
C9orf3-209ENST00000460573 GPR75-ASB3A0A0A6YYF3 556 aa27.21■■□□□ 1.95
C9orf3-209ENST00000460573 MAP4K4O95819 1239 aaPredicted RBP27.21■■□□□ 1.95
C9orf3-209ENST00000460573 ZSCAN25Q6NSZ9 544 aa27.21■■□□□ 1.95
C9orf3-209ENST00000460573 EDC3Q96F86 508 aaKnown RBP27.21■■□□□ 1.95
C9orf3-209ENST00000460573 CDCA5Q96FF9 252 aa27.21■■□□□ 1.95
C9orf3-209ENST00000460573 TDRD3Q9H7E2 651 aaKnown RBP27.21■■□□□ 1.95
C9orf3-209ENST00000460573 TMOD2Q9NZR1 351 aa27.21■■□□□ 1.95
C9orf3-209ENST00000460573 ZNF70Q9UC06 446 aaPredicted RBP27.21■■□□□ 1.95
C9orf3-209ENST00000460573 MYH2Q9UKX2 1941 aa27.21■■□□□ 1.95
C9orf3-209ENST00000460573 ECM29Q5VYK3 1845 aa27.2■■□□□ 1.95
C9orf3-209ENST00000460573 LRRFIP1Q32MZ4 808 aaKnown RBP27.2■■□□□ 1.94
C9orf3-209ENST00000460573 KBTBD3Q8NAB2 608 aa27.2■■□□□ 1.94
C9orf3-209ENST00000460573 NOL10Q9BSC4 688 aaKnown RBP27.2■■□□□ 1.94
C9orf3-209ENST00000460573 BAG3O95817 575 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 HSPA8P11142 646 aaKnown RBP27.19■■□□□ 1.94
C9orf3-209ENST00000460573 PDE4AP27815 886 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 NOGQ13253 232 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 TNFAIP1Q13829 316 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 SLC9C2Q5TAH2 1124 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 RGMBQ6NW40 437 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 CERS3Q8IU89 383 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 MAGEB6Q8N7X4 407 aa27.19■■□□□ 1.94
C9orf3-209ENST00000460573 CLRN2A0PK11 232 aa27.18■■□□□ 1.94
C9orf3-209ENST00000460573 CYP7A1P22680 504 aa27.18■■□□□ 1.94
C9orf3-209ENST00000460573 BTDP43251 543 aa27.18■■□□□ 1.94
C9orf3-209ENST00000460573 ZNF157P51786 506 aaPredicted RBP27.18■■□□□ 1.94
C9orf3-209ENST00000460573 FKBP1CQ5VVH2 108 aa27.18■■□□□ 1.94
C9orf3-209ENST00000460573 MYO5AQ9Y4I1 1855 aaKnown RBP27.17■■□□□ 1.94
C9orf3-209ENST00000460573 PDE6AP16499 860 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 PLCG2P16885 1265 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 NF2P35240 595 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 TTLL12Q14166 644 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-209ENST00000460573 TICAM2Q86XR7 235 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 EVI5LQ96CN4 794 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 VEZTQ9HBM0 779 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 USP40Q9NVE5 1235 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 PPP2R3BQ9Y5P8 575 aa27.17■■□□□ 1.94
C9orf3-209ENST00000460573 TNNI2P48788 182 aa27.16■■□□□ 1.94
C9orf3-209ENST00000460573 PPP4CP60510 307 aa27.16■■□□□ 1.94
C9orf3-209ENST00000460573 CDC42EP5Q6NZY7 148 aa27.16■■□□□ 1.94
C9orf3-209ENST00000460573 CCDC102AQ96A19 550 aa27.16■■□□□ 1.94
C9orf3-209ENST00000460573 CA12O43570 354 aa27.15■■□□□ 1.94
C9orf3-209ENST00000460573 ZFYP08048 801 aaPredicted RBP27.15■■□□□ 1.94
C9orf3-209ENST00000460573 ADD2P35612 726 aa27.15■■□□□ 1.94
C9orf3-209ENST00000460573 UBE3CQ15386 1083 aa27.15■■□□□ 1.94
C9orf3-209ENST00000460573 SCAF8Q9UPN6 1271 aaKnown RBP27.14■■□□□ 1.94
C9orf3-209ENST00000460573 ZNF532Q9HCE3 1301 aa27.14■■□□□ 1.93
C9orf3-209ENST00000460573 ADGRA1Q86SQ6 560 aa27.13■■□□□ 1.93
C9orf3-209ENST00000460573 FAM83AQ86UY5 434 aa27.13■■□□□ 1.93
C9orf3-209ENST00000460573 FSD1Q9BTV5 496 aa27.13■■□□□ 1.93
C9orf3-209ENST00000460573 DEFB129Q9H1M3 183 aa27.13■■□□□ 1.93
C9orf3-209ENST00000460573 TSKSQ9UJT2 592 aa27.13■■□□□ 1.93
C9orf3-209ENST00000460573 TCRBV5S4A2TA0A5A2 114 aa27.12■■□□□ 1.93
C9orf3-209ENST00000460573 RHBDL3P58872 404 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms