RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 MYO5AQ9Y4I1 1855 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-204ENST00000460431 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 UBE2Q2LH0YL09 131 aa20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 TNNI2P48788 182 aa20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 NBPF12Q5TAG4 269 aaPredicted RBP20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 TBC1D9Q6ZT07 1266 aa20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 CLASRPQ8N2M8 674 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-204ENST00000460431 APBB1O00213 710 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 CACNB3P54284 484 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 MECOMQ03112 1051 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 TTLL12Q14166 644 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 CDC42EP5Q6NZY7 148 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 ARMC9Q7Z3E5 817 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 TEPSINQ96N21 525 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 SNRKQ9NRH2 765 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 RNF186Q9NXI6 227 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 SAGE1Q9NXZ1 904 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 TMOD2Q9NZR1 351 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 GAKO14976 1311 aa20.16■□□□□ 0.82
SMARCD3-204ENST00000460431 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 ZNF384Q8TF68 577 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 TMEM39BQ9GZU3 492 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 AK9Q5TCS8 1911 aa20.15■□□□□ 0.82
SMARCD3-204ENST00000460431 SSC5DA1L4H1 1573 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 PPP1R12BO60237 982 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 TRPA1O75762 1119 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 PRKG1Q13976 671 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 LDLRAD1Q5T700 205 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 NSUN4Q96CB9 384 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 DCTPP1Q9H773 170 aa20.14■□□□□ 0.81
SMARCD3-204ENST00000460431 CYP2E1P05181 493 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 ZAP70P43403 619 aa20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 MCOLN1Q9GZU1 580 aa20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 RAI14Q9P0K7 980 aa20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 LRP2BPQ9P2M1 347 aa20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 ANGEL1Q9UNK9 670 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-204ENST00000460431 MROH7-TTC4A0A0A0MT08 1334 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 GPR75-ASB3A0A0A6YYF3 556 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 IGSF3O75054 1194 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 USP2O75604 605 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 LDHCP07864 332 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 IFIT2P09913 472 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 GSTO1P78417 241 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 CDAN1Q8IWY9 1227 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 FZD1Q9UP38 647 aa20.12■□□□□ 0.81
SMARCD3-204ENST00000460431 FAM151AQ8WW52 585 aa20.11■□□□□ 0.81
SMARCD3-204ENST00000460431 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
SMARCD3-204ENST00000460431 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
SMARCD3-204ENST00000460431 BTDP43251 543 aa20.1■□□□□ 0.81
SMARCD3-204ENST00000460431 NFIAQ12857 509 aa20.1■□□□□ 0.81
SMARCD3-204ENST00000460431 IDI2Q9BXS1 227 aa20.1■□□□□ 0.81
SMARCD3-204ENST00000460431 CASP8AP2Q9UKL3 1982 aa20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 IREB2P48200 963 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 DGKZQ13574 1117 aa20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 FAM198AQ9UFP1 575 aa20.09■□□□□ 0.81
SMARCD3-204ENST00000460431 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 CCDC85CA6NKD9 419 aa20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 RHBDL3P58872 404 aa20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 TCP10Q12799 353 aa20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 AAMPQ13685 434 aa20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 BCL11AQ9H165 835 aa20.08■□□□□ 0.81
SMARCD3-204ENST00000460431 MAST2Q6P0Q8 1798 aa20.08■□□□□ 0.8
SMARCD3-204ENST00000460431 DOCK2Q92608 1830 aa20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 SMARCA5O60264 1052 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 TM4SF4P48230 202 aa20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 HOOK2Q96ED9 719 aa20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 ANTXR1Q9H6X2 564 aa20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 SUPT16HQ9Y5B9 1047 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 NDUFB9Q9Y6M9 179 aa20.07■□□□□ 0.8
SMARCD3-204ENST00000460431 ENTPD3O75355 529 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 WDHD1O75717 1129 aaPredicted RBP20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 ZFPM1Q8IX07 1006 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 ANKRD13AQ8IZ07 590 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 SLC10A4Q96EP9 437 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 CLMNQ96JQ2 1002 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 OTOFQ9HC10 1997 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 RFX7Q2KHR2 1363 aa20.06■□□□□ 0.8
SMARCD3-204ENST00000460431 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
SMARCD3-204ENST00000460431 ATP5JP18859 108 aa20.05■□□□□ 0.8
SMARCD3-204ENST00000460431 RGS3P49796 1198 aa20.05■□□□□ 0.8
SMARCD3-204ENST00000460431 PPP4CP60510 307 aa20.05■□□□□ 0.8
SMARCD3-204ENST00000460431 IDH1O75874 414 aaKnown RBP20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 MAP3K9P80192 1104 aa20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 MKRN3Q13064 507 aaKnown RBP20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 TTF1Q15361 905 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 DCAF15Q66K64 600 aa20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 DDX4Q9NQI0 724 aaKnown RBP20.04■□□□□ 0.8
SMARCD3-204ENST00000460431 CDK5RAP2Q96SN8 1893 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms