RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 DUSP27Q5VZP5 1158 aa5.88□□□□□ -1.47
RFC4-211ENST00000460408 ASAP3Q8TDY4 903 aa5.88□□□□□ -1.47
RFC4-211ENST00000460408 ZC3H7BQ9UGR2 993 aaKnown RBP5.88□□□□□ -1.47
RFC4-211ENST00000460408 PHACTR2O75167 634 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 TNFRSF21O75509 655 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 PAPLNO95428 1278 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 ZNF16P17020 682 aaPredicted RBP5.87□□□□□ -1.47
RFC4-211ENST00000460408 MAP7Q14244 749 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 PEAR1Q5VY43 1037 aaPredicted RBP5.87□□□□□ -1.47
RFC4-211ENST00000460408 TMC1Q8TDI8 760 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 SNX29Q8TEQ0 813 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 BCL2L13Q9BXK5 485 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 ACTL7BQ9Y614 415 aa5.87□□□□□ -1.47
RFC4-211ENST00000460408 NFICP08651 508 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 PLCB3Q01970 1234 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 TAGLNQ01995 201 aaKnown RBP5.86□□□□□ -1.47
RFC4-211ENST00000460408 ORC1Q13415 861 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 EAPPQ56P03 285 aaPredicted RBP5.86□□□□□ -1.47
RFC4-211ENST00000460408 GIPC2Q8TF65 315 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 NIF3L1Q9GZT8 377 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 SEMA6CQ9H3T2 930 aa5.86□□□□□ -1.47
RFC4-211ENST00000460408 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.85□□□□□ -1.47
RFC4-211ENST00000460408 UNCXA6NJT0 531 aa5.85□□□□□ -1.47
RFC4-211ENST00000460408 ENOX2Q16206 610 aaKnown RBP5.85□□□□□ -1.47
RFC4-211ENST00000460408 ZNF765Q7L2R6 523 aa5.85□□□□□ -1.47
RFC4-211ENST00000460408 BCL7CQ8WUZ0 217 aaPredicted RBP5.85□□□□□ -1.47
RFC4-211ENST00000460408 ACSS3Q9H6R3 686 aa5.85□□□□□ -1.47
RFC4-211ENST00000460408 LRRC4CQ9HCJ2 640 aa5.85□□□□□ -1.47
RFC4-211ENST00000460408 LATS2Q9NRM7 1088 aa5.85□□□□□ -1.47
RFC4-211ENST00000460408 CTSBP07858 339 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 HP1BP3Q5SSJ5 553 aaPredicted RBP5.84□□□□□ -1.47
RFC4-211ENST00000460408 SEZ6L2Q6UXD5 910 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 NPM2Q86SE8 214 aaKnown RBP5.84□□□□□ -1.47
RFC4-211ENST00000460408 WFDC3Q8IUB2 231 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 DNAJC25Q9H1X3 360 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 GSX1Q9H4S2 264 aaPredicted RBP5.84□□□□□ -1.47
RFC4-211ENST00000460408 C1GALT1Q9NS00 363 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 FOXD3Q9UJU5 478 aaPredicted RBP5.84□□□□□ -1.47
RFC4-211ENST00000460408 SLC5A6Q9Y289 635 aa5.84□□□□□ -1.47
RFC4-211ENST00000460408 METTL12A8MUP2 240 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 EIF1AYO14602 144 aaKnown RBP5.83□□□□□ -1.48
RFC4-211ENST00000460408 CYP11A1P05108 521 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 RAB6AP20340 208 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 MAOBP27338 520 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 MAPK8P45983 427 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 RBM25P49756 843 aaKnown RBP5.83□□□□□ -1.48
RFC4-211ENST00000460408 PCDH1Q08174 1060 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 POU4F3Q15319 338 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 ZNF423Q2M1K9 1284 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 STK11IPQ8N1F8 1099 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 CSRNP1Q96S65 589 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 SETDB2Q96T68 719 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 CLEC4MQ9H2X3 399 aaPredicted RBP5.83□□□□□ -1.48
RFC4-211ENST00000460408 ZFYVE1Q9HBF4 777 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 FAM105AQ9NUU6 356 aa5.83□□□□□ -1.48
RFC4-211ENST00000460408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
RFC4-211ENST00000460408 CARMIL2Q6F5E8 1435 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 PNMA6FA0A0J9YX94 578 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 BIN1O00499 593 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 LDHBP07195 334 aaKnown RBP5.82□□□□□ -1.48
RFC4-211ENST00000460408 ZNF792Q3KQV3 632 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 ZNF648Q5T619 568 aaPredicted RBP5.82□□□□□ -1.48
RFC4-211ENST00000460408 OGFOD3Q6PK18 319 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 DYMQ7RTS9 669 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 SPRED2Q7Z698 418 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 ZFYVE28Q9HCC9 887 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 KIAA1522Q9P206 1035 aaPredicted RBP5.82□□□□□ -1.48
RFC4-211ENST00000460408 WWC3Q9ULE0 1092 aa5.82□□□□□ -1.48
RFC4-211ENST00000460408 A0A096LPE4 126 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 A0A1W2PPZ6 126 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 CPNE3O75131 537 aaKnown RBP5.81□□□□□ -1.48
RFC4-211ENST00000460408 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
RFC4-211ENST00000460408 NEFLP07196 543 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 PLCL1Q15111 1095 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
RFC4-211ENST00000460408 AKAP4Q5JQC9 854 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 USPL1Q5W0Q7 1092 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 ZNF574Q6ZN55 896 aaPredicted RBP5.81□□□□□ -1.48
RFC4-211ENST00000460408 CCNJLQ8IV13 435 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 FBF1Q8TES7 1133 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 MISP3Q96FF7 219 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 RNF19AQ9NV58 838 aa5.81□□□□□ -1.48
RFC4-211ENST00000460408 SYNGAP1Q96PV0 1343 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 DBX1A6NMT0 343 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 DYNC1LI2O43237 492 aaPredicted RBP5.8□□□□□ -1.48
RFC4-211ENST00000460408 ASPAP45381 313 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 ALG1LQ6GMV1 187 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 ATG4DQ86TL0 474 aaPredicted RBP5.8□□□□□ -1.48
RFC4-211ENST00000460408 TCF12Q99081 682 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 TRIM56Q9BRZ2 755 aaKnown RBP5.8□□□□□ -1.48
RFC4-211ENST00000460408 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
RFC4-211ENST00000460408 A0A1W2PP55 124 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 VAMP1P23763 118 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 GRIA4P48058 902 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 FGD1P98174 961 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 SPRED3Q2MJR0 410 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 MRRFQ96E11 262 aaKnown RBP5.79□□□□□ -1.48
RFC4-211ENST00000460408 DUSP9Q99956 384 aaKnown RBP5.79□□□□□ -1.48
RFC4-211ENST00000460408 RAD18Q9NS91 495 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms