RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
EPB41-208ENST00000460378 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 ADCY9O60503 1353 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 GOLGA6L4A6NEF3 574 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 PSMA5P28066 241 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 KIF5BP33176 963 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.55
EPB41-208ENST00000460378 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
EPB41-208ENST00000460378 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
EPB41-208ENST00000460378 TIMM10P62072 90 aa11.64□□□□□ -0.55
EPB41-208ENST00000460378 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
EPB41-208ENST00000460378 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
EPB41-208ENST00000460378 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
EPB41-208ENST00000460378 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
EPB41-208ENST00000460378 PRAMEF18Q5VWM3 479 aa11.64□□□□□ -0.55
EPB41-208ENST00000460378 CTU1Q7Z7A3 348 aaKnown RBP11.64□□□□□ -0.55
EPB41-208ENST00000460378 SP3Q02447 781 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 VAT1LQ9HCJ6 419 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 M0QZ92 97 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 ADM5C9JUS6 153 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
EPB41-208ENST00000460378 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 CATIPQ7Z7H3 387 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
EPB41-208ENST00000460378 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
EPB41-208ENST00000460378 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
EPB41-208ENST00000460378 ESR2Q92731 530 aa11.63□□□□□ -0.55
EPB41-208ENST00000460378 COPB2P35606 906 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 HOXC10Q9NYD6 342 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 ZHX1Q9UKY1 873 aaPredicted RBP11.62□□□□□ -0.55
EPB41-208ENST00000460378 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
EPB41-208ENST00000460378 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
EPB41-208ENST00000460378 SPOUT1Q5T280 376 aaKnown RBP11.62□□□□□ -0.55
EPB41-208ENST00000460378 MEIS3Q99687 375 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 PPP4R2Q9NY27 417 aa11.62□□□□□ -0.55
EPB41-208ENST00000460378 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
EPB41-208ENST00000460378 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 CKAP2LQ8IYA6 745 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 ABCC6O95255 1503 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 PIBF1Q8WXW3 757 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 ICA1Q05084 483 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 H7C1W4 665 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 SLC1A4P43007 532 aa11.61□□□□□ -0.55
EPB41-208ENST00000460378 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 SLIT3O75094 1523 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 CCDC12Q8WUD4 166 aaPredicted RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 RBM19Q9Y4C8 960 aaKnown RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 H3BQV1 296 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 CIAO1O76071 339 aa11.6□□□□□ -0.55
EPB41-208ENST00000460378 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 ADD3Q9UEY8 706 aaKnown RBP11.6□□□□□ -0.55
EPB41-208ENST00000460378 USP17L10C9JJH3 530 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 TRAF5O00463 557 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 MBD4O95243 580 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 GNAQP50148 359 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 SPP2Q13103 211 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 BECN1Q14457 450 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 LTBP3Q9NS15 1303 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 CCDC196A0A1B0GTZ2 297 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
EPB41-208ENST00000460378 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
EPB41-208ENST00000460378 KIFC2Q96AC6 838 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 KRT23Q9C075 422 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 CACNB3P54284 484 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 HOMER2Q9NSB8 354 aa11.59□□□□□ -0.55
EPB41-208ENST00000460378 EVI5O60447 810 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 ARRDC4Q8NCT1 418 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 CCDC47Q96A33 483 aaKnown RBP11.58□□□□□ -0.56
EPB41-208ENST00000460378 EVI5LQ96CN4 794 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 IFIT3O14879 490 aaKnown RBP11.58□□□□□ -0.56
EPB41-208ENST00000460378 MX1P20591 662 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 TNNI3KQ59H18 835 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 PRMT2P55345 433 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 CNNM2Q9H8M5 875 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 C19orf81C9J6K1 198 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms