RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 GGA1Q9UJY5 639 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 GTF2IP78347 998 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 SF3B2Q13435 895 aaKnown RBP10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 WTAPQ15007 396 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 ZC3H12CQ9C0D7 883 aaKnown RBP10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 NEDD4P46934 1319 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 GSG1L2A8MUP6 293 aa10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
NUDCD3-203ENST00000460110 TOGARAM1Q9Y4F4 1720 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 CRYBG1Q9Y4K1 1723 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 CYP2D6P10635 497 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 IARSP41252 1262 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 HMGN5P82970 282 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 STK38Q15208 465 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 ZRSR1Q15695 479 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 AKNAD1Q5T1N1 836 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 MAPKAPK5Q8IW41 473 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 NSUN7Q8NE18 718 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 RBM17Q96I25 401 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 GRAPQ13588 217 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 AMOTL1Q8IY63 956 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 GRAPLQ8TC17 118 aaPredicted RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
NUDCD3-203ENST00000460110 PFKFB2O60825 505 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 PPARAQ07869 468 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 GPSM2P81274 684 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 UBE2Q2LH0YL09 131 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 FOXP2O15409 715 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 SCNN1DP51172 638 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 EVX2Q03828 476 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 KCNB2Q92953 911 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 CARMIL3Q8ND23 1372 aa10.92□□□□□ -0.66
NUDCD3-203ENST00000460110 USP17L8P0C7I0 530 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 MARCKSP29966 332 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ANTXR2P58335 489 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 EXOSC10Q01780 885 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 COL23A1Q86Y22 540 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ADAMTS7Q9UKP4 1686 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 UBE2HP62256 183 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 DDR1Q08345 913 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ZSCAN29Q8IWY8 852 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ESR2Q92731 530 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 KRT23Q9C075 422 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 RNF41Q9H4P4 317 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 DACT1Q9NYF0 836 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ITGB4P16144 1822 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 NMT2O60551 498 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 ZNF827Q17R98 1081 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 TRIM22Q8IYM9 498 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 PROM2Q8N271 834 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 DYNLL2Q96FJ2 89 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 SDF4Q9BRK5 362 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 MXD3Q9BW11 206 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
NUDCD3-203ENST00000460110 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 GNAT2P19087 354 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 MB21D2Q8IYB1 491 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 RBSNQ9H1K0 784 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 XDHP47989 1333 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 RTN1Q16799 776 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 SLC10A5Q5PT55 438 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 DEFB132Q7Z7B7 95 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 SCAND2PQ9GZW5 306 aaPredicted RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 TNMDQ9H2S6 317 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 DBNDD1Q9H9R9 158 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 KCNJ14Q9UNX9 436 aa10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
NUDCD3-203ENST00000460110 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 SPTY2D1Q68D10 685 aaPredicted RBP10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 APOA5Q6Q788 366 aa10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 NLGN1Q8N2Q7 840 aa10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 CFAP45Q9UL16 551 aa10.9□□□□□ -0.67
NUDCD3-203ENST00000460110 TCRBV5S4A2TA0A5A2 114 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 BAG3O95817 575 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 LIG1P18858 919 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms