RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 MAOBP27338 520 aa8.45□□□□□ -1.06
CCDC50-203ENST00000460064 MCM4P33991 863 aa8.45□□□□□ -1.06
CCDC50-203ENST00000460064 CRKP46108 304 aa8.45□□□□□ -1.06
CCDC50-203ENST00000460064 SUZ12Q15022 739 aaKnown RBP8.45□□□□□ -1.06
CCDC50-203ENST00000460064 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
CCDC50-203ENST00000460064 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
CCDC50-203ENST00000460064 FAM221AA4D161 298 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 TRIM37O94972 964 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 ECEL1O95672 775 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 BPNT1O95861 308 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 FGRP09769 529 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 PTPN11Q06124 597 aaPredicted RBP8.44□□□□□ -1.06
CCDC50-203ENST00000460064 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
CCDC50-203ENST00000460064 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
CCDC50-203ENST00000460064 MPP2Q14168 576 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 SCARA3Q6AZY7 606 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 MAP4K3Q8IVH8 894 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 SLITRK4Q8IW52 837 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 CPLX3Q8WVH0 158 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
CCDC50-203ENST00000460064 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
CCDC50-203ENST00000460064 DNAJC2Q99543 621 aaKnown RBP8.44□□□□□ -1.06
CCDC50-203ENST00000460064 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
CCDC50-203ENST00000460064 CILPO75339 1184 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 STK10O94804 968 aaKnown RBP8.43□□□□□ -1.06
CCDC50-203ENST00000460064 NLRP12P59046 1061 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 CWF19L2Q2TBE0 894 aaKnown RBP8.43□□□□□ -1.06
CCDC50-203ENST00000460064 GPBAR1Q8TDU6 330 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 ARMC5Q96C12 935 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 USP26Q9BXU7 913 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 PCDHA4Q9UN74 947 aa8.43□□□□□ -1.06
CCDC50-203ENST00000460064 CD68P34810 354 aaPredicted RBP8.42□□□□□ -1.06
CCDC50-203ENST00000460064 SOX9P48436 509 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 PDE3AQ14432 1141 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 SVOPQ8N4V2 548 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 GAL3ST3Q96A11 431 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 NRSN2Q9GZP1 204 aa8.42□□□□□ -1.06
CCDC50-203ENST00000460064 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
CCDC50-203ENST00000460064 DGKGP49619 791 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 ZNF165P49910 485 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 RPL6Q02878 288 aaKnown RBP8.41□□□□□ -1.06
CCDC50-203ENST00000460064 RBL2Q08999 1139 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
CCDC50-203ENST00000460064 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.41□□□□□ -1.06
CCDC50-203ENST00000460064 HIRIP3Q9BW71 556 aaPredicted RBP8.41□□□□□ -1.06
CCDC50-203ENST00000460064 LRRC3Q9BY71 257 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 BRMS1Q9HCU9 246 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 KRT82Q9NSB4 513 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 MRVI1Q9Y6F6 885 aa8.41□□□□□ -1.06
CCDC50-203ENST00000460064 TM4SF5O14894 197 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 DEAF1O75398 565 aaPredicted RBP8.4□□□□□ -1.06
CCDC50-203ENST00000460064 CTSBP07858 339 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.06
CCDC50-203ENST00000460064 LIG1P18858 919 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 HNRNPUQ00839 825 aaKnown RBP eCLIP8.4□□□□□ -1.06
CCDC50-203ENST00000460064 REC114Q7Z4M0 266 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 CACNA2D2Q9NY47 1150 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 STRIP2Q9ULQ0 834 aa8.4□□□□□ -1.06
CCDC50-203ENST00000460064 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 FBXW10Q5XX13 1052 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 GK5Q6ZS86 529 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 DCAF11Q8TEB1 546 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
CCDC50-203ENST00000460064 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 KCNK4Q9NYG8 393 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
CCDC50-203ENST00000460064 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 LOC100289279A0A1B0GTE1 492 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 ZNF862O60290 1169 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 ADAM11O75078 769 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 CDK8P49336 464 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 INPP5AQ14642 412 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
CCDC50-203ENST00000460064 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
CCDC50-203ENST00000460064 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
CCDC50-203ENST00000460064 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 CRBNQ96SW2 442 aa8.38□□□□□ -1.07
CCDC50-203ENST00000460064 SRRTQ9BXP5 876 aaKnown RBP8.38□□□□□ -1.07
CCDC50-203ENST00000460064 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 SLFN14P0C7P3 912 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 ETFBP38117 255 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 RAC1P63000 192 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 SNRPNP63162 240 aaKnown RBP8.37□□□□□ -1.07
CCDC50-203ENST00000460064 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 EXOSC6Q5RKV6 272 aaKnown RBP8.37□□□□□ -1.07
CCDC50-203ENST00000460064 HDXQ7Z353 690 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
CCDC50-203ENST00000460064 ELMO3Q96BJ8 720 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 TRIM11Q96F44 468 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 PLVAPQ9BX97 442 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 LNPKQ9C0E8 428 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms