RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 FCHSD1Q86WN1 690 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC144CPQ8IYA2 1237 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCAR2Q8N163 923 aaKnown RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 MPNDQ8N594 471 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 KIF18AQ8NI77 898 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ERO1AQ96HE7 468 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 C8orf76Q96K31 380 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 NEUROD6Q96NK8 337 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 STK32BQ9NY57 414 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 TUBE1Q9UJT0 475 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCNL1Q9UK58 526 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 NHSQ6T4R5 1651 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC69A6NI79 296 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 CBFA2T2O43439 604 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 PRC1O43663 620 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 PTCD1O75127 700 aaKnown RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 SLC3A2P08195 630 aaKnown RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 TIMM10P62072 90 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 LRMPQ12912 555 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 SLC39A14Q15043 492 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 STK38Q15208 465 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 UBE3CQ15386 1083 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC57Q2TAC2 916 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 CT47A1Q5JQC4 288 aaPredicted RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 ANO1Q5XXA6 986 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 SYNE3Q6ZMZ3 975 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 ZNF397Q8NF99 534 aaPredicted RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 OSBP2Q969R2 916 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 SDF4Q9BRK5 362 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 L2HGDHQ9H9P8 463 aa7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 RNF216Q9NWF9 866 aaPredicted RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 DDX41Q9UJV9 622 aaKnown RBP7.1□□□□□ -1.27
UBQLN4-202ENST00000459954 MYH8P13535 1937 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 LRP5O75197 1615 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 CICQ96RK0 1608 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 NEDD4P46934 1319 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 STK36Q9NRP7 1315 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 M0R2C6 588 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 ZNF213O14771 459 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 FOXP2O15409 715 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 ZNF202O95125 648 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 FGAP02671 866 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 RCAN1P53805 252 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 CCT2P78371 535 aaKnown RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 KIF23Q02241 960 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 TRDNQ13061 729 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 EZH2Q15910 746 aaKnown RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 SLC15A2Q16348 729 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 TPRNQ4KMQ1 711 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 HSP90AB3PQ58FF7 597 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 TTC39AQ5SRH9 613 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 AXDND1Q5T1B0 1012 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 TMED8Q6PL24 325 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 RALYLQ86SE5 291 aaKnown RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 NBPF11Q86T75 865 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 SGMS1Q86VZ5 419 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 PROM2Q8N271 834 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 AOPEPQ8N6M6 819 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 WASF1Q92558 559 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 XAGE2Q96GT9 111 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 AK7Q96M32 723 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 C16orf45Q96MC5 204 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 SRRTQ9BXP5 876 aaKnown RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 LRRC2Q9BYS8 371 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 FAM53CQ9NYF3 392 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 ORC3Q9UBD5 711 aaPredicted RBP7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 HPSEQ9Y251 543 aa7.09□□□□□ -1.27
UBQLN4-202ENST00000459954 SBF2Q86WG5 1849 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 A0A1B0GUL6 1792 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 CNTNAP4Q9C0A0 1308 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 KLF18A0A0U1RQI7 1052 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 CPLX1O14810 134 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 CUTAO60888 179 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 TPM1P09493 284 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 UQCRFS1P1P0C7P4 283 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 U2AF2P26368 475 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 ADD2P35612 726 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 ATP6V1AP38606 617 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 LIFRP42702 1097 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 NDUFA8P51970 172 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 NCAPHQ15003 741 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 ATP2B3Q16720 1220 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 LRRC24Q50LG9 513 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 GORABQ5T7V8 394 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 TAF3Q5VWG9 929 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 TTLL7Q6ZT98 887 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 DEFB132Q7Z7B7 95 aa7.08□□□□□ -1.28
UBQLN4-202ENST00000459954 ZBTB38Q8NAP3 1195 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms