RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
COL7A1-203ENST00000459756 HOOK2Q96ED9 719 aa19.83■□□□□ 0.77
COL7A1-203ENST00000459756 CLMNQ96JQ2 1002 aa19.83■□□□□ 0.77
COL7A1-203ENST00000459756 COG6Q9Y2V7 657 aa19.83■□□□□ 0.77
COL7A1-203ENST00000459756 RPAP1Q9BWH6 1393 aaPredicted RBP19.83■□□□□ 0.76
COL7A1-203ENST00000459756 MYH2Q9UKX2 1941 aa19.82■□□□□ 0.76
COL7A1-203ENST00000459756 ZBTB48P10074 688 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-203ENST00000459756 TM4SF4P48230 202 aa19.82■□□□□ 0.76
COL7A1-203ENST00000459756 SREBF2Q12772 1141 aa19.82■□□□□ 0.76
COL7A1-203ENST00000459756 MKRN3Q13064 507 aaKnown RBP19.82■□□□□ 0.76
COL7A1-203ENST00000459756 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-203ENST00000459756 ZBTB40Q9NUA8 1239 aa19.82■□□□□ 0.76
COL7A1-203ENST00000459756 GAKO14976 1311 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 PDE3AQ14432 1141 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 CCDC158Q5M9N0 1113 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 ERICH6Q7L0X2 663 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 ERC1Q8IUD2 1116 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 RPAP2Q8IXW5 612 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-203ENST00000459756 FAM151AQ8WW52 585 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 FAM163AQ96GL9 167 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-203ENST00000459756 WNK4Q96J92 1243 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 USP40Q9NVE5 1235 aa19.81■□□□□ 0.76
COL7A1-203ENST00000459756 MCAMP43121 646 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 HSP90AB4PQ58FF6 505 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 TTC39AQ5SRH9 613 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 PI16Q6UXB8 463 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 DBNDD2Q9BQY9 259 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 OTOFQ9HC10 1997 aa19.8■□□□□ 0.76
COL7A1-203ENST00000459756 MANSC4A6NHS7 340 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-203ENST00000459756 INHBEP58166 350 aa19.79■□□□□ 0.76
COL7A1-203ENST00000459756 MECOMQ03112 1051 aa19.79■□□□□ 0.76
COL7A1-203ENST00000459756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL7A1-203ENST00000459756 ZNF512BQ96KM6 892 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-203ENST00000459756 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-203ENST00000459756 CASP8AP2Q9UKL3 1982 aa19.79■□□□□ 0.76
COL7A1-203ENST00000459756 LAMB1P07942 1786 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 HMMRO75330 724 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 GSTO1P78417 241 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 MAP3K9P80192 1104 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 NFIAQ12857 509 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 DCAF15Q66K64 600 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-203ENST00000459756 TBC1D9Q6ZT07 1266 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 EXOC6BQ9Y2D4 811 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 CSADQ9Y600 493 aa19.78■□□□□ 0.76
COL7A1-203ENST00000459756 MROH7-TTC4A0A0A0MT08 1334 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 LDHCP07864 332 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 TCP10Q12799 353 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 VGLL4Q14135 290 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 EAF2Q96CJ1 260 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-203ENST00000459756 IDI2Q9BXS1 227 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 ELP3Q9H9T3 547 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 FAM198AQ9UFP1 575 aa19.77■□□□□ 0.76
COL7A1-203ENST00000459756 DBNLQ9UJU6 430 aaKnown RBP19.77■□□□□ 0.76
COL7A1-203ENST00000459756 GPR75-ASB3A0A0A6YYF3 556 aa19.76■□□□□ 0.75
COL7A1-203ENST00000459756 BTDP43251 543 aa19.76■□□□□ 0.75
COL7A1-203ENST00000459756 C20orf194Q5TEA3 1177 aa19.76■□□□□ 0.75
COL7A1-203ENST00000459756 NSUN4Q96CB9 384 aaKnown RBP19.76■□□□□ 0.75
COL7A1-203ENST00000459756 RAI14Q9P0K7 980 aa19.76■□□□□ 0.75
COL7A1-203ENST00000459756 LRP2BPQ9P2M1 347 aa19.76■□□□□ 0.75
COL7A1-203ENST00000459756 ENTPD3O75355 529 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 ALDH1A1P00352 501 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 ZNF384Q8TF68 577 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 OPTNQ96CV9 577 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 WRNIP1Q96S55 665 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 ZNF341Q9BYN7 854 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-203ENST00000459756 SNRKQ9NRH2 765 aa19.75■□□□□ 0.75
COL7A1-203ENST00000459756 TLR7Q9NYK1 1049 aaKnown RBP19.75■□□□□ 0.75
COL7A1-203ENST00000459756 AK9Q5TCS8 1911 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 RFX7Q2KHR2 1363 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 IGSF3O75054 1194 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 MAP4K4O95819 1239 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-203ENST00000459756 GJA5P36382 358 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 RGS3P49796 1198 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 RHPN1Q8TCX5 695 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 CFHR5Q9BXR6 569 aa19.74■□□□□ 0.75
COL7A1-203ENST00000459756 WDHD1O75717 1129 aaPredicted RBP19.73■□□□□ 0.75
COL7A1-203ENST00000459756 MIGA2Q7L4E1 593 aa19.73■□□□□ 0.75
COL7A1-203ENST00000459756 AACSQ86V21 672 aa19.73■□□□□ 0.75
COL7A1-203ENST00000459756 IFNL1Q8IU54 200 aa19.73■□□□□ 0.75
COL7A1-203ENST00000459756 CAPN15O75808 1086 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 TBC1D8O95759 1140 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 CYP2E1P05181 493 aaPredicted RBP19.72■□□□□ 0.75
COL7A1-203ENST00000459756 NOM1Q5C9Z4 860 aaKnown RBP19.72■□□□□ 0.75
COL7A1-203ENST00000459756 ZFPM1Q8IX07 1006 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 KIF1BPQ96EK5 621 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 SNCAIPQ9Y6H5 919 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
COL7A1-203ENST00000459756 TESPA1A2RU30 521 aaPredicted RBP19.71■□□□□ 0.75
COL7A1-203ENST00000459756 SPDYE5A6NIY4 337 aa19.71■□□□□ 0.75
COL7A1-203ENST00000459756 RAB11FIP3O75154 756 aa19.71■□□□□ 0.75
COL7A1-203ENST00000459756 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
COL7A1-203ENST00000459756 RHBDL3P58872 404 aa19.71■□□□□ 0.75
COL7A1-203ENST00000459756 OTUD7BQ6GQQ9 843 aa19.71■□□□□ 0.75
COL7A1-203ENST00000459756 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
COL7A1-203ENST00000459756 ERO1BQ86YB8 467 aa19.71■□□□□ 0.75
COL7A1-203ENST00000459756 CLASRPQ8N2M8 674 aaKnown RBP19.71■□□□□ 0.75
COL7A1-203ENST00000459756 ZKSCAN4Q969J2 545 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms