RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 TMEM31Q5JXX7 168 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 DNTTIP2Q5QJE6 756 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 PPM1EQ8WY54 764 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 CELF1Q92879 486 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 ZNF428Q96B54 188 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 ZNF830Q96NB3 372 aaPredicted RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 EYA3Q99504 573 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 PAIP2Q9BPZ3 127 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 UTP14AQ9BVJ6 771 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 ZC3H12CQ9C0D7 883 aaKnown RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 CPA4Q9UI42 421 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 GABRQQ9UN88 632 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 CHD6Q8TD26 2715 aa5.35□□□□□ -1.55
RGPD6-206ENST00000459645 ANKRD11Q6UB99 2663 aaPredicted RBP5.35□□□□□ -1.55
RGPD6-206ENST00000459645 WDR87Q6ZQQ6 2873 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 COL4A1P02462 1669 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 C5orf42Q9H799 3197 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 REV3LO60673 3130 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 ADGRA2Q96PE1 1338 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 USP17L3A6NCW0 530 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 USP17L4A6NCW7 530 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 BTBD19C9JJ37 291 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 G3V3G9 751 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 ADCY3O60266 1144 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 RGS3P49796 1198 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 MCCD1P59942 119 aaPredicted RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 MRPS5P82675 430 aaKnown RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 CCDC96Q2M329 555 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 NBPF12Q5TAG4 269 aaPredicted RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 DCAF8Q5TAQ9 597 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 POTEEQ6S8J3 1075 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 C17orf99Q6UX52 265 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 KIF6Q6ZMV9 814 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 USP17L1Q7RTZ2 530 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 TMC4Q7Z404 712 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 PPP1R42Q7Z4L9 355 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 APOBEC3FQ8IUX4 373 aaKnown RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 SLAIN1Q8ND83 568 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 ZBED3Q96IU2 234 aaPredicted RBP5.34□□□□□ -1.55
RGPD6-206ENST00000459645 FAM210AQ96ND0 272 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 NBPF3Q9H094 633 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 JADE2Q9NQC1 790 aa5.34□□□□□ -1.55
RGPD6-206ENST00000459645 ATRXP46100 2492 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 CEMIPQ8WUJ3 1361 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 USP34Q70CQ2 3546 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 TAF1P21675 1872 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 PFASO15067 1338 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 AOX1Q06278 1338 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 UNCXA6NJT0 531 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 GNAT3A8MTJ3 354 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 UFL1O94874 794 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 HOXD10P28358 340 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 ARID4AP29374 1257 aaPredicted RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 GTF2A2P52657 109 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 SATB1Q01826 763 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 NHLH1Q02575 133 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 SHHQ15465 462 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 PARP10Q53GL7 1025 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 DACT2Q5SW24 774 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 C9orf50Q5SZB4 431 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 GIGYF2Q6Y7W6 1299 aaKnown RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 CXorf38Q8TB03 319 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 KHSRPQ92945 711 aaKnown RBP eCLIP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 PNNQ9H307 717 aaKnown RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 C11orf49Q9H6J7 331 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 THEGQ9P2T0 379 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 MAGEC2Q9UBF1 373 aaPredicted RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 RRP7AQ9Y3A4 280 aaKnown RBP5.33□□□□□ -1.56
RGPD6-206ENST00000459645 PCDHAC2Q9Y5I4 1007 aa5.33□□□□□ -1.56
RGPD6-206ENST00000459645 COL3A1P02461 1466 aaPredicted RBP5.32□□□□□ -1.56
RGPD6-206ENST00000459645 UNC79Q9P2D8 2635 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 CHD7Q9P2D1 2997 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 BMP1P13497 986 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 MYL6BP14649 208 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 CLCN1P35523 988 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 FLT3LGP49771 235 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 DMTNQ08495 405 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 MTA1Q13330 715 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 VGLL4Q14135 290 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 LRRC26Q2I0M4 334 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 PPP4R3BQ5MIZ7 849 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 CDAN1Q8IWY9 1227 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 CACTIN-AS1Q8N1I8 211 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 OGFOD1Q8N543 542 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 LSM14AQ8ND56 463 aaKnown RBP5.32□□□□□ -1.56
RGPD6-206ENST00000459645 HELBQ8NG08 1087 aaPredicted RBP5.32□□□□□ -1.56
RGPD6-206ENST00000459645 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.32□□□□□ -1.56
RGPD6-206ENST00000459645 CEP126Q9P2H0 1117 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
RGPD6-206ENST00000459645 MRVI1Q9Y6F6 885 aa5.32□□□□□ -1.56
RGPD6-206ENST00000459645 LRRC37AA6NMS7 1700 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 KMT2BQ9UMN6 2715 aaPredicted RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 CLRN2A0PK11 232 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 TPD52L2O43399 206 aaKnown RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 GPR37L1O60883 481 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 WDHD1O75717 1129 aaPredicted RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 CETPP11597 493 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms