RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 KIAA2012Q0VF49 1180 aa28.96■■■□□ 2.23
U2AF1-204ENST00000459639 INTS4Q96HW7 963 aaKnown RBP28.96■■■□□ 2.23
U2AF1-204ENST00000459639 FOXD4L1Q9NU39 408 aa28.96■■■□□ 2.23
U2AF1-204ENST00000459639 SOGA3Q5TF21 947 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 CERS3Q8IU89 383 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 SLF2Q8IX21 1173 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 NCOA7Q8NI08 942 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 SDR42E1Q8WUS8 393 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 TCEANC2Q96MN5 208 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 SH2B1Q9NRF2 756 aaPredicted RBP28.95■■■□□ 2.22
U2AF1-204ENST00000459639 PIM2Q9P1W9 311 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 PSME4Q14997 1843 aa28.95■■■□□ 2.22
U2AF1-204ENST00000459639 SCN9AQ15858 1988 aa28.94■■■□□ 2.22
U2AF1-204ENST00000459639 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
U2AF1-204ENST00000459639 EXOSC10Q01780 885 aaKnown RBP28.94■■■□□ 2.22
U2AF1-204ENST00000459639 TOB2Q14106 344 aaPredicted RBP28.94■■■□□ 2.22
U2AF1-204ENST00000459639 PSMD1Q99460 953 aa28.94■■■□□ 2.22
U2AF1-204ENST00000459639 CWC22Q9HCG8 908 aaKnown RBP28.94■■■□□ 2.22
U2AF1-204ENST00000459639 CDK5RAP2Q96SN8 1893 aa28.94■■■□□ 2.22
U2AF1-204ENST00000459639 PPP4CP60510 307 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 DIXDC1Q155Q3 683 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 TBC1D10CQ8IV04 446 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 NOL10Q9BSC4 688 aaKnown RBP28.93■■■□□ 2.22
U2AF1-204ENST00000459639 DBNDD1Q9H9R9 158 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 BAG3O95817 575 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 RALYLQ86SE5 291 aaKnown RBP28.93■■■□□ 2.22
U2AF1-204ENST00000459639 FAM163AQ96GL9 167 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-204ENST00000459639 CD2APQ9Y5K6 639 aa28.93■■■□□ 2.22
U2AF1-204ENST00000459639 NAV1Q8NEY1 1877 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 WDR19Q8NEZ3 1342 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 ECE2O60344 883 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 TRDNQ13061 729 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 Q6ZUG5 572 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 MB21D2Q8IYB1 491 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-204ENST00000459639 FBXW7Q969H0 707 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 ATP8A2Q9NTI2 1148 aa28.92■■■□□ 2.22
U2AF1-204ENST00000459639 GAKO14976 1311 aa28.91■■■□□ 2.22
U2AF1-204ENST00000459639 FKBP1AP62942 108 aaKnown RBP28.91■■■□□ 2.22
U2AF1-204ENST00000459639 AOC3Q16853 763 aa28.91■■■□□ 2.22
U2AF1-204ENST00000459639 AGXT2Q9BYV1 514 aa28.91■■■□□ 2.22
U2AF1-204ENST00000459639 PTGER2P43116 358 aa28.9■■■□□ 2.22
U2AF1-204ENST00000459639 FBXL16Q8N461 479 aa28.9■■■□□ 2.22
U2AF1-204ENST00000459639 ANAPC4Q9UJX5 808 aa28.9■■■□□ 2.22
U2AF1-204ENST00000459639 TPCN1Q9ULQ1 816 aa28.9■■■□□ 2.22
U2AF1-204ENST00000459639 MCM5P33992 734 aa28.89■■■□□ 2.22
U2AF1-204ENST00000459639 CERS5Q8N5B7 392 aa28.89■■■□□ 2.22
U2AF1-204ENST00000459639 LARP6Q9BRS8 491 aaKnown RBP28.89■■■□□ 2.22
U2AF1-204ENST00000459639 FER1L6Q2WGJ9 1857 aa28.89■■■□□ 2.22
U2AF1-204ENST00000459639 FOCADQ5VW36 1801 aa28.89■■■□□ 2.22
U2AF1-204ENST00000459639 GPR75-ASB3A0A0A6YYF3 556 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 PPIP5K2O43314 1243 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 LARGE1O95461 756 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 PPARAQ07869 468 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 STRIP1Q5VSL9 837 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 STAG1Q8WVM7 1258 aa28.89■■■□□ 2.21
U2AF1-204ENST00000459639 FGD1P98174 961 aa28.88■■■□□ 2.21
U2AF1-204ENST00000459639 DALRD3Q5D0E6 543 aaKnown RBP28.88■■■□□ 2.21
U2AF1-204ENST00000459639 AKNAD1Q5T1N1 836 aa28.88■■■□□ 2.21
U2AF1-204ENST00000459639 VPS33BQ9H267 617 aa28.88■■■□□ 2.21
U2AF1-204ENST00000459639 CNNM2Q9H8M5 875 aa28.88■■■□□ 2.21
U2AF1-204ENST00000459639 DCP1AQ9NPI6 582 aaPredicted RBP28.88■■■□□ 2.21
U2AF1-204ENST00000459639 PLCG2P16885 1265 aa28.87■■■□□ 2.21
U2AF1-204ENST00000459639 BTDP43251 543 aa28.87■■■□□ 2.21
U2AF1-204ENST00000459639 ME3Q16798 604 aa28.87■■■□□ 2.21
U2AF1-204ENST00000459639 CTDSPL2Q05D32 466 aa28.86■■■□□ 2.21
U2AF1-204ENST00000459639 RNF41Q9H4P4 317 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-204ENST00000459639 DDX60LQ5H9U9 1706 aaKnown RBP28.86■■■□□ 2.21
U2AF1-204ENST00000459639 NEDD4P46934 1319 aa28.86■■■□□ 2.21
U2AF1-204ENST00000459639 SH3RF3Q8TEJ3 882 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-204ENST00000459639 BRF1Q92994 677 aa28.86■■■□□ 2.21
U2AF1-204ENST00000459639 KRT23Q9C075 422 aa28.86■■■□□ 2.21
U2AF1-204ENST00000459639 ARPP21Q9UBL0 812 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-204ENST00000459639 PRC1O43663 620 aa28.85■■■□□ 2.21
U2AF1-204ENST00000459639 MFSD6Q6ZSS7 791 aa28.85■■■□□ 2.21
U2AF1-204ENST00000459639 LRRC2Q9BYS8 371 aa28.85■■■□□ 2.21
U2AF1-204ENST00000459639 PPP1R1BQ9UD71 204 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-204ENST00000459639 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-204ENST00000459639 USP17L3A6NCW0 530 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 USP17L4A6NCW7 530 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 ANTXR2P58335 489 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 SBK1Q52WX2 424 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 DACT2Q5SW24 774 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 CTR9Q6PD62 1173 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 USP17L1Q7RTZ2 530 aa28.84■■■□□ 2.21
U2AF1-204ENST00000459639 TTF2Q9UNY4 1162 aaKnown RBP28.84■■■□□ 2.21
U2AF1-204ENST00000459639 MINDY4BA8MYZ0 360 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 DAGLAQ9Y4D2 1042 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 ADAMTSL1Q8N6G6 1762 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 ARFGEF1Q9Y6D6 1849 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 PCP11498 1178 aaKnown RBP28.83■■■□□ 2.21
U2AF1-204ENST00000459639 USP5P45974 858 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 CHST3Q7LGC8 479 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 CCDC83Q8IWF9 413 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 MXD3Q9BW11 206 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 KCNQ5Q9NR82 932 aa28.83■■■□□ 2.21
U2AF1-204ENST00000459639 MKRN1Q9UHC7 482 aaKnown RBP28.83■■■□□ 2.21
U2AF1-204ENST00000459639 ECM29Q5VYK3 1845 aa28.82■■■□□ 2.2
U2AF1-204ENST00000459639 B4E1Z4 1266 aa28.82■■■□□ 2.2
U2AF1-204ENST00000459639 ST3GAL1Q11201 340 aa28.82■■■□□ 2.2
U2AF1-204ENST00000459639 TACC3Q9Y6A5 838 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms