RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 TTC30BQ8N4P2 665 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 TNFAIP3P21580 790 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 MRPS27Q92552 414 aaKnown RBP17.99■□□□□ 0.47
HDAC7-217ENST00000459625 KIFAP3Q92845 792 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 ANKFY1Q9P2R3 1169 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
HDAC7-217ENST00000459625 UBE2HP62256 183 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.474e-7■□□□□ 10
HDAC7-217ENST00000459625 ZNF569Q5MCW4 686 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 ZBED4O75132 1171 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 ZSCAN22P10073 491 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-217ENST00000459625 ANKS4BQ8N8V4 417 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 CCDC110Q8TBZ0 833 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 CALML3P27482 149 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 IL15P40933 162 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-217ENST00000459625 TXKP42681 527 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 SV2BQ7L1I2 683 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.98■□□□□ 0.47
HDAC7-217ENST00000459625 PKNOX2Q96KN3 472 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 ARMT1Q9H993 441 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 NEMFO60524 1076 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 CD19P15391 556 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 STMN4Q9H169 189 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-217ENST00000459625 BICDL2A1A5D9 508 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 BMP15O95972 392 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 XRCC6P12956 609 aaKnown RBP eCLIP17.98■□□□□ 0.476e-6■■■■■ 31.4
HDAC7-217ENST00000459625 TTC6Q86TZ1 520 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 SKA2Q8WVK7 121 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-217ENST00000459625 GGA1Q9UJY5 639 aa17.98■□□□□ 0.47
HDAC7-217ENST00000459625 NPHP3Q7Z494 1330 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 CHMP6Q96FZ7 201 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 ARHGEF35A5YM69 484 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
HDAC7-217ENST00000459625 CEP57Q86XR8 500 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 CFBP00751 764 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 OATP04181 439 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 CPLX4Q7Z7G2 160 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 TRIM31Q9BZY9 425 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 CASKIN1Q8WXD9 1431 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 TAF5LO75529 589 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 FAM89AQ96GI7 184 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
HDAC7-217ENST00000459625 NOC2LQ9Y3T9 749 aaKnown RBP17.97■□□□□ 0.47
HDAC7-217ENST00000459625 RNF113AO15541 343 aaKnown RBP17.96■□□□□ 0.47
HDAC7-217ENST00000459625 STK10O94804 968 aaKnown RBP17.96■□□□□ 0.47
HDAC7-217ENST00000459625 FAM193BQ96PV7 902 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-217ENST00000459625 ERICH3Q5RHP9 1530 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 SKILP12757 684 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 CALCOCO2Q13137 446 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 CLUL1Q15846 466 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 KSR1Q8IVT5 923 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 NIM1KQ8IY84 436 aa17.96■□□□□ 0.47
HDAC7-217ENST00000459625 PRDM1O75626 825 aa17.96■□□□□ 0.46
HDAC7-217ENST00000459625 ALDH3A1P30838 453 aa17.96■□□□□ 0.46
HDAC7-217ENST00000459625 GTPBP4Q9BZE4 634 aaKnown RBP17.96■□□□□ 0.46
HDAC7-217ENST00000459625 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.46
HDAC7-217ENST00000459625 SDSP20132 328 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 LRMPQ12912 555 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 RDH13Q8NBN7 331 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 GLG1Q92896 1179 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 SPC25Q9HBM1 224 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 SPTLC2O15270 562 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 DNM2P50570 870 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 PARD3BQ8TEW8 1205 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 SYNJ2BP-COX16A0A087WUM0 186 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 MKRN3Q13064 507 aaKnown RBP17.95■□□□□ 0.46
HDAC7-217ENST00000459625 COX16Q9P0S2 106 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 IGBP1P78318 339 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 Q3C1V9 767 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 TTC14Q96N46 770 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 CARD10Q9BWT7 1032 aa17.95■□□□□ 0.46
HDAC7-217ENST00000459625 MTRF1LQ9UGC7 380 aaKnown RBP17.95■□□□□ 0.46
HDAC7-217ENST00000459625 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-217ENST00000459625 BZW2Q9Y6E2 419 aaKnown RBP17.95■□□□□ 0.46
HDAC7-217ENST00000459625 KRT86O43790 486 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 GNAT2P19087 354 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 CCDC121Q6ZUS5 278 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 KIF9Q9HAQ2 790 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 SEPT10Q9P0V9 454 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 B4E1Z4 1266 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 VIMP08670 466 aaKnown RBP17.94■□□□□ 0.46
HDAC7-217ENST00000459625 HIBADHP31937 336 aaKnown RBP17.94■□□□□ 0.46
HDAC7-217ENST00000459625 ST7Q9NRC1 585 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 TRPC6Q9Y210 931 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 GOLGA6CA6NDK9 693 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 GOLGA6BA6NDN3 693 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 GOLGA6DP0CG33 693 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 KRT83P78385 493 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 PDE4DQ08499 809 aa17.94■□□□□ 0.46
HDAC7-217ENST00000459625 CEP85LQ5SZL2 805 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms