RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ERCC4Q92889 916 aaPredicted RBP9.84□□□□□ -0.83
VPS50-208ENST00000458707 TIGD1Q96MW7 591 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.84□□□□□ -0.83
VPS50-208ENST00000458707 MYH6P13533 1939 aa9.84□□□□□ -0.83
VPS50-208ENST00000458707 CCDC66A2RUB6 948 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SPTLC2O15270 562 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 ZNF202O95125 648 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SLC3A2P08195 630 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 CMA1P23946 247 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SLC39A6Q13433 755 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 STK38Q15208 465 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 ERCC6LQ2NKX8 1250 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SYT10Q6XYQ8 523 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 HSD3B7Q9H2F3 369 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.842e-6■■■■□ 23.6
VPS50-208ENST00000458707 FHOD1Q9Y613 1164 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 CLIC4Q9Y696 253 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 MYH3P11055 1940 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 A0A0G2JLW4 131 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 GOLIM4O00461 696 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 RNF113AO15541 343 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 ZRANB2O95218 330 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS50-208ENST00000458707 SMC2O95347 1197 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SNRPA1P09661 255 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 FOXO4P98177 505 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 GUCY1B3Q02153 619 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 ZRSR1Q15695 479 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 ZNF496Q96IT1 587 aaPredicted RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 PLCD4Q9BRC7 762 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 CARD10Q9BWT7 1032 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 SRRTQ9BXP5 876 aaKnown RBP9.83□□□□□ -0.84
VPS50-208ENST00000458707 TMX1Q9H3N1 280 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 TUBE1Q9UJT0 475 aa9.83□□□□□ -0.84
VPS50-208ENST00000458707 PAPPAQ13219 1627 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 A0A087WZG4 1122 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
VPS50-208ENST00000458707 MYO1BO43795 1136 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 DHX16O60231 1041 aaKnown RBP9.82□□□□□ -0.84
VPS50-208ENST00000458707 FANCCQ00597 558 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 ESCO1Q5FWF5 840 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 TRIM65Q6PJ69 517 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 FCHSD1Q86WN1 690 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 C8orf76Q96K31 380 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 MYH8P13535 1937 aa9.82□□□□□ -0.84
VPS50-208ENST00000458707 FAM237AA0A1B0GTK4 181 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 H7C1W4 665 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 M0R2C6 588 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 APPP05067 770 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 PHKG2P15735 406 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 IL15P40933 162 aaPredicted RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 ANO1Q5XXA6 986 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 LMBR1LQ6UX01 489 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 LRRN4CLQ8ND94 238 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 PLBD2Q8NHP8 589 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 MEGF6O75095 1541 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 FOXP2O15409 715 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 CBFA2T2O43439 604 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 ATP8B1O43520 1251 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 PNMA6AP0CW24 399 aaPredicted RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 PFKFB1P16118 471 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 EMP3P54852 163 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 KIF23Q02241 960 aaPredicted RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 MB21D2Q8IYB1 491 aaPredicted RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 FBXW7Q969H0 707 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 ORC3Q9UBD5 711 aaPredicted RBP9.81□□□□□ -0.84
VPS50-208ENST00000458707 HPSEQ9Y251 543 aa9.81□□□□□ -0.84
VPS50-208ENST00000458707 MYH2Q9UKX2 1941 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 MROH7-TTC4A0A0A0MT08 1334 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 MYH13Q9UKX3 1938 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 TADA3O75528 432 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 CIAO1O76071 339 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 TPM1P09493 284 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 CYP2C19P33261 490 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
VPS50-208ENST00000458707 SLC39A14Q15043 492 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 ARHGAP29Q52LW3 1261 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 REXO1L1PQ8IX06 675 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 NOL10Q9BSC4 688 aaKnown RBP9.8□□□□□ -0.84
VPS50-208ENST00000458707 UBXN6Q9BZV1 441 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 TSPYL1Q9H0U9 437 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
VPS50-208ENST00000458707 ARGLU1Q9NWB6 273 aaPredicted RBP9.8□□□□□ -0.84
VPS50-208ENST00000458707 CPDO75976 1380 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ABCC12Q96J65 1359 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 EFCAB8A8MWE9 144 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 KIF28PB7ZC32 967 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 PTCD1O75127 700 aaKnown RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 PPP6R2O75170 966 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms