RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 A0A1B0GUL7 405 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 SIK1P57059 783 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 TNNI3KQ59H18 835 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 TRMT1LQ7Z2T5 733 aaKnown RBP12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 SPATA24Q86W54 205 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 SMCR8Q8TEV9 937 aaPredicted RBP12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.47
AMBRA1-202ENST00000458649 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 URI1O94763 535 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 BCORL1Q5H9F3 1711 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 KCNQ3O43525 872 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 MBD4O95243 580 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 TIMM10P62072 90 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 CCDC97Q96F63 343 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 F13A1P00488 732 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■□□□□ 11
AMBRA1-202ENST00000458649 TAF12Q16514 161 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
AMBRA1-202ENST00000458649 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 STAT6P42226 847 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 TRIM75PA6NK02 468 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 TBC1D5Q92609 795 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 CTNNA2P26232 953 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 TDRD12Q587J7 1177 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 SGSM2O43147 1006 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 NEMFO60524 1076 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 TRIM37O94972 964 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
AMBRA1-202ENST00000458649 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 SPAG1Q07617 926 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 PPP2R5BQ15173 497 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 VGLL3A8MV65 326 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 KRT2P35908 639 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 TMEM87BQ96K49 555 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 LPXNO60711 386 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 APPBP2Q92624 585 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 PLVAPQ9BX97 442 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 FAM13AO94988 1023 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
AMBRA1-202ENST00000458649 CCDC175P0C221 793 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 GBP6Q6ZN66 633 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 NOP56O00567 594 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 ZNF165P49910 485 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 M0QZ92 97 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 ACTN2P35609 894 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 MCTP2Q6DN12 878 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
AMBRA1-202ENST00000458649 HSPA4P34932 840 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 CTSWP56202 376 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 STX1AQ16623 288 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 TTC12Q9H892 705 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 PSMA7O14818 248 aa12.1□□□□□ -0.47
AMBRA1-202ENST00000458649 SAP30BPQ9UHR5 308 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms