RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-214ENST00000458640 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
DDX39B-214ENST00000458640 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
DDX39B-214ENST00000458640 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-214ENST00000458640 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
DDX39B-214ENST00000458640 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 TUBBP07437 444 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 HNRNPH1P31943 449 aaKnown RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ANO6Q4KMQ2 910 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 SALL3Q9BXA9 1300 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 H7C1W4 665 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 GCFC2P16383 781 aaKnown RBP13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ZNF165P49910 485 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ICA1Q05084 483 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 GPATCH3Q96I76 525 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 ACBD3Q9H3P7 528 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 STAP2Q9UGK3 403 aa13.05□□□□□ -0.32
DDX39B-214ENST00000458640 NPHP1O15259 732 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 ELF1P32519 619 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
DDX39B-214ENST00000458640 HDXQ7Z353 690 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 FAM71BQ8TC56 605 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 TNMDQ9H2S6 317 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
DDX39B-214ENST00000458640 ATXN2Q99700 1313 aaKnown RBP13.04□□□□□ -0.32
DDX39B-214ENST00000458640 BTAF1O14981 1849 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 NUP98P52948 1817 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 IPO7O95373 1038 aaKnown RBP13.03□□□□□ -0.32
DDX39B-214ENST00000458640 CASP7P55210 303 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 PPP1R13BQ96KQ4 1090 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
DDX39B-214ENST00000458640 LRRC31Q6UY01 552 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
DDX39B-214ENST00000458640 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
DDX39B-214ENST00000458640 ERLIN1O75477 346 aa13.02□□□□□ -0.33
DDX39B-214ENST00000458640 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
DDX39B-214ENST00000458640 EVCP57679 992 aa13.02□□□□□ -0.33
DDX39B-214ENST00000458640 ADCY2Q08462 1091 aa13.02□□□□□ -0.33
DDX39B-214ENST00000458640 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
DDX39B-214ENST00000458640 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
DDX39B-214ENST00000458640 FIBPO43427 364 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 RDXP35241 583 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 MCM8Q9UJA3 840 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 CHUKO15111 745 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 KCNQ2O43526 872 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 SYT1P21579 422 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 USP5P45974 858 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 E4F1Q66K89 784 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 CABS1Q96KC9 395 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 VPS18Q9P253 973 aa13.01□□□□□ -0.33
DDX39B-214ENST00000458640 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
DDX39B-214ENST00000458640 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 GPTP24298 496 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 KRT85P78386 507 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 CALR3Q96L12 384 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 GBP3Q9H0R5 595 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 NUCKS1Q9H1E3 243 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 SBF2Q86WG5 1849 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 H3BQF6 201 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 NF2P35240 595 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 TRAF1Q13077 416 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 IQCB1Q15051 598 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 AP1ARQ63HQ0 302 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms