RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 EYA2O00167 538 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-227ENST00000458564 KIF22Q14807 665 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 LPIN2Q92539 896 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 KCNH4Q9UQ05 1017 aa13.07□□□□□ -0.32
HDLBP-227ENST00000458564 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
HDLBP-227ENST00000458564 ZBTB22O15209 634 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 SLC5A1P13866 664 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 C17orf99Q6UX52 265 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 SSH1Q8WYL5 1049 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 ARHGAP39Q9C0H5 1083 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
HDLBP-227ENST00000458564 E9PSI1 815 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 INPP5BP32019 993 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 NOL9Q5SY16 702 aaKnown RBP13.05□□□□□ -0.32
HDLBP-227ENST00000458564 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 CEP290O15078 2479 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 SALL1Q9NSC2 1324 aa13.05□□□□□ -0.32
HDLBP-227ENST00000458564 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 CIAO1O76071 339 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-227ENST00000458564 SH3TC2Q8TF17 1288 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
HDLBP-227ENST00000458564 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-227ENST00000458564 SEMA3EO15041 775 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 PRDX5P30044 214 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDLBP-227ENST00000458564 NFIAQ12857 509 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 MOGSQ13724 837 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 DIXDC1Q155Q3 683 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 ALDH1L2Q3SY69 923 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 FAM198AQ9UFP1 575 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
HDLBP-227ENST00000458564 PDHXO00330 501 aa13.02□□□□□ -0.33
HDLBP-227ENST00000458564 CTGFP29279 349 aa13.02□□□□□ -0.33
HDLBP-227ENST00000458564 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-227ENST00000458564 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
HDLBP-227ENST00000458564 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.33
HDLBP-227ENST00000458564 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
HDLBP-227ENST00000458564 CXCL11O14625 94 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
HDLBP-227ENST00000458564 HOXD10P28358 340 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 PSMC4P43686 418 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 SLFN5Q08AF3 891 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 TCP10Q12799 353 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 PARK7Q99497 189 aaKnown RBP13.01□□□□□ -0.33
HDLBP-227ENST00000458564 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 DENND2AQ9ULE3 1009 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 GAKO14976 1311 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
HDLBP-227ENST00000458564 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
HDLBP-227ENST00000458564 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
HDLBP-227ENST00000458564 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
HDLBP-227ENST00000458564 BCRP11274 1271 aa13□□□□□ -0.33
HDLBP-227ENST00000458564 OSBPP22059 807 aa13□□□□□ -0.33
HDLBP-227ENST00000458564 ZGPATQ8N5A5 531 aaKnown RBP13□□□□□ -0.33
HDLBP-227ENST00000458564 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
HDLBP-227ENST00000458564 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
HDLBP-227ENST00000458564 MYPNQ86TC9 1320 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-227ENST00000458564 ENTPD3O75355 529 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 MYCP01106 439 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-227ENST00000458564 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-227ENST00000458564 GRK4P32298 578 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-227ENST00000458564 PHKA1P46020 1223 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 MAP3K10Q02779 954 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 MTFR1Q15390 333 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-227ENST00000458564 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 SCYL3Q8IZE3 742 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 RAET1EQ8TD07 263 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 SIL1Q9H173 461 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 USP40Q9NVE5 1235 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 SLC45A1Q9Y2W3 748 aa12.99□□□□□ -0.33
HDLBP-227ENST00000458564 DOCK2Q92608 1830 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 H0YGN5 161 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-227ENST00000458564 GJB1P08034 283 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 GJA8P48165 433 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms