RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 RAI14Q9P0K7 980 aa28.36■■■□□ 2.13
CBX3-204ENST00000456948 THSD7BQ9C0I4 1608 aa28.36■■■□□ 2.13
CBX3-204ENST00000456948 APBB1O00213 710 aa28.35■■■□□ 2.13
CBX3-204ENST00000456948 NBPF12Q5TAG4 269 aaPredicted RBP28.35■■■□□ 2.13
CBX3-204ENST00000456948 FAM163AQ96GL9 167 aaPredicted RBP28.35■■■□□ 2.13
CBX3-204ENST00000456948 PRDM10Q9NQV6 1147 aa28.35■■■□□ 2.13
CBX3-204ENST00000456948 USP40Q9NVE5 1235 aa28.35■■■□□ 2.13
CBX3-204ENST00000456948 DBNLQ9UJU6 430 aaKnown RBP28.35■■■□□ 2.13
CBX3-204ENST00000456948 AOX1Q06278 1338 aa28.35■■■□□ 2.13
CBX3-204ENST00000456948 IFIT2P09913 472 aaKnown RBP28.34■■■□□ 2.13
CBX3-204ENST00000456948 MOB2Q70IA6 237 aa28.34■■■□□ 2.13
CBX3-204ENST00000456948 CA12O43570 354 aa28.33■■■□□ 2.13
CBX3-204ENST00000456948 SLC10A3P09131 477 aa28.33■■■□□ 2.13
CBX3-204ENST00000456948 HSPA8P11142 646 aaKnown RBP28.33■■■□□ 2.13
CBX3-204ENST00000456948 NOL10Q9BSC4 688 aaKnown RBP28.33■■■□□ 2.13
CBX3-204ENST00000456948 IL1RAPL2Q9NP60 686 aa28.33■■■□□ 2.13
CBX3-204ENST00000456948 MECOMQ03112 1051 aa28.32■■■□□ 2.12
CBX3-204ENST00000456948 MAP3K11Q16584 847 aa28.32■■■□□ 2.12
CBX3-204ENST00000456948 CDC42EP5Q6NZY7 148 aa28.32■■■□□ 2.12
CBX3-204ENST00000456948 SLC10A4Q96EP9 437 aa28.32■■■□□ 2.12
CBX3-204ENST00000456948 TMEM39BQ9GZU3 492 aa28.32■■■□□ 2.12
CBX3-204ENST00000456948 FAM155AB1AL88 458 aaPredicted RBP28.31■■■□□ 2.12
CBX3-204ENST00000456948 MAP4K4O95819 1239 aaPredicted RBP28.31■■■□□ 2.12
CBX3-204ENST00000456948 CACNB3P54284 484 aa28.31■■■□□ 2.12
CBX3-204ENST00000456948 PI16Q6UXB8 463 aa28.31■■■□□ 2.12
CBX3-204ENST00000456948 TBC1D9Q6ZT07 1266 aa28.31■■■□□ 2.12
CBX3-204ENST00000456948 SNRKQ9NRH2 765 aa28.31■■■□□ 2.12
CBX3-204ENST00000456948 GAKO14976 1311 aa28.31■■■□□ 2.12
CBX3-204ENST00000456948 MYH2Q9UKX2 1941 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 CAPN15O75808 1086 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 LDLRAD1Q5T700 205 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 RASAL3Q86YV0 1011 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 FAM151AQ8WW52 585 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 ZIC5Q96T25 663 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 TSKSQ9UJT2 592 aa28.3■■■□□ 2.12
CBX3-204ENST00000456948 MROH7-TTC4A0A0A0MT08 1334 aa28.29■■■□□ 2.12
CBX3-204ENST00000456948 KIF23Q02241 960 aaPredicted RBP28.29■■■□□ 2.12
CBX3-204ENST00000456948 DCAF15Q66K64 600 aa28.29■■■□□ 2.12
CBX3-204ENST00000456948 ANKRD13AQ8IZ07 590 aa28.29■■■□□ 2.12
CBX3-204ENST00000456948 LRRCC1Q9C099 1032 aa28.29■■■□□ 2.12
CBX3-204ENST00000456948 BCL11AQ9H165 835 aa28.29■■■□□ 2.12
CBX3-204ENST00000456948 NSUN4Q96CB9 384 aaKnown RBP28.28■■■□□ 2.12
CBX3-204ENST00000456948 TEPSINQ96N21 525 aa28.28■■■□□ 2.12
CBX3-204ENST00000456948 TLR7Q9NYK1 1049 aaKnown RBP28.28■■■□□ 2.12
CBX3-204ENST00000456948 USP2O75604 605 aaPredicted RBP28.27■■■□□ 2.12
CBX3-204ENST00000456948 BAG3O95817 575 aa28.27■■■□□ 2.12
CBX3-204ENST00000456948 BTDP43251 543 aa28.27■■■□□ 2.12
CBX3-204ENST00000456948 AAMPQ13685 434 aa28.27■■■□□ 2.12
CBX3-204ENST00000456948 NAA16Q6N069 864 aaPredicted RBP28.27■■■□□ 2.12
CBX3-204ENST00000456948 GPR75-ASB3A0A0A6YYF3 556 aa28.26■■■□□ 2.11
CBX3-204ENST00000456948 TCP10Q12799 353 aa28.26■■■□□ 2.11
CBX3-204ENST00000456948 TMED8Q6PL24 325 aaPredicted RBP28.26■■■□□ 2.11
CBX3-204ENST00000456948 RPAP1Q9BWH6 1393 aaPredicted RBP28.25■■■□□ 2.11
CBX3-204ENST00000456948 ENTPD3O75355 529 aa28.25■■■□□ 2.11
CBX3-204ENST00000456948 CYP2E1P05181 493 aaPredicted RBP28.25■■■□□ 2.11
CBX3-204ENST00000456948 ZAP70P43403 619 aa28.25■■■□□ 2.11
CBX3-204ENST00000456948 TTF1Q15361 905 aaPredicted RBP28.25■■■□□ 2.11
CBX3-204ENST00000456948 IDI2Q9BXS1 227 aa28.25■■■□□ 2.11
CBX3-204ENST00000456948 PLCG2P16885 1265 aa28.24■■■□□ 2.11
CBX3-204ENST00000456948 CSADQ9Y600 493 aa28.24■■■□□ 2.11
CBX3-204ENST00000456948 AK9Q5TCS8 1911 aa28.24■■■□□ 2.11
CBX3-204ENST00000456948 MAP3K9P80192 1104 aa28.23■■■□□ 2.11
CBX3-204ENST00000456948 SREBF2Q12772 1141 aa28.23■■■□□ 2.11
CBX3-204ENST00000456948 MAP3K12Q12852 859 aa28.23■■■□□ 2.11
CBX3-204ENST00000456948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.23■■■□□ 2.11
CBX3-204ENST00000456948 DCTPP1Q9H773 170 aa28.23■■■□□ 2.11
CBX3-204ENST00000456948 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.23■■■□□ 2.11
CBX3-204ENST00000456948 FZD1Q9UP38 647 aa28.23■■■□□ 2.11
CBX3-204ENST00000456948 ZSCAN29Q8IWY8 852 aaPredicted RBP28.22■■■□□ 2.11
CBX3-204ENST00000456948 CRBNQ96SW2 442 aa28.22■■■□□ 2.11
CBX3-204ENST00000456948 ZBTB47Q9UFB7 747 aaPredicted RBP28.22■■■□□ 2.11
CBX3-204ENST00000456948 SSC5DA1L4H1 1573 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 IDH1O75874 414 aaKnown RBP28.21■■■□□ 2.11
CBX3-204ENST00000456948 ZBTB48P10074 688 aaPredicted RBP28.21■■■□□ 2.11
CBX3-204ENST00000456948 RGS3P49796 1198 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 INHBEP58166 350 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 NFIAQ12857 509 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 CERS3Q8IU89 383 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 CSRNP1Q96S65 589 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 ZNF341Q9BYN7 854 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 AKAP11Q9UKA4 1901 aa28.21■■■□□ 2.11
CBX3-204ENST00000456948 NPM3O75607 178 aaKnown RBP28.2■■■□□ 2.1
CBX3-204ENST00000456948 SPRYD7Q5W111 196 aa28.2■■■□□ 2.1
CBX3-204ENST00000456948 GPATCH3Q96I76 525 aa28.2■■■□□ 2.1
CBX3-204ENST00000456948 SAGE1Q9NXZ1 904 aa28.2■■■□□ 2.1
CBX3-204ENST00000456948 FAM198AQ9UFP1 575 aa28.2■■■□□ 2.1
CBX3-204ENST00000456948 CDAN1Q8IWY9 1227 aa28.19■■■□□ 2.1
CBX3-204ENST00000456948 MANSC4A6NHS7 340 aaPredicted RBP28.18■■■□□ 2.1
CBX3-204ENST00000456948 MKRN3Q13064 507 aaKnown RBP28.18■■■□□ 2.1
CBX3-204ENST00000456948 PICALMQ13492 652 aa28.18■■■□□ 2.1
CBX3-204ENST00000456948 ZNF384Q8TF68 577 aa28.18■■■□□ 2.1
CBX3-204ENST00000456948 CLMNQ96JQ2 1002 aa28.18■■■□□ 2.1
CBX3-204ENST00000456948 PIH1D3Q9NQM4 214 aaKnown RBP28.18■■■□□ 2.1
CBX3-204ENST00000456948 PCDHB15Q9Y5E8 787 aa28.18■■■□□ 2.1
CBX3-204ENST00000456948 WDHD1O75717 1129 aaPredicted RBP28.17■■■□□ 2.1
CBX3-204ENST00000456948 PPP4CP60510 307 aa28.17■■■□□ 2.1
CBX3-204ENST00000456948 TEX11Q8IYF3 940 aa28.17■■■□□ 2.1
CBX3-204ENST00000456948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.17■■■□□ 2.1
CBX3-204ENST00000456948 WNK4Q96J92 1243 aa28.17■■■□□ 2.1
CBX3-204ENST00000456948 WRNIP1Q96S55 665 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms